RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 SEPHS2Q99611 448 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 GORASP2Q9H8Y8 452 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 CCDC177Q9NQR7 707 aaPredicted RBP17.84■□□□□ 0.45
HOXC11-201ENST00000243082 PLAGL1Q9UM63 463 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 PCDHGB4Q9UN71 923 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 INVSQ9Y283 1065 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 AP3M1Q9Y2T2 418 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 PCDHGB5Q9Y5G0 923 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 ATG2BQ96BY7 2078 aa17.84■□□□□ 0.45
HOXC11-201ENST00000243082 SAC3D1A6NKF1 404 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 FCGR1AP12314 374 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 KELP23276 732 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 HNRNPFP52597 415 aaKnown RBP17.83■□□□□ 0.45
HOXC11-201ENST00000243082 CHN2P52757 468 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 POLE2P56282 527 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 SRSF11Q05519 484 aaKnown RBP17.83■□□□□ 0.45
HOXC11-201ENST00000243082 DPY19L1Q2PZI1 675 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 NXPE4Q6UWF7 544 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 MTSS1LQ765P7 747 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 CALHM3Q86XJ0 350 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 DCUN1D3Q8IWE4 304 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 C10orf111Q8N326 155 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 TMEM132CQ8N3T6 1108 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 SETD7Q8WTS6 366 aaKnown RBP17.83■□□□□ 0.45
HOXC11-201ENST00000243082 FAM131CQ96AQ9 280 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 MIEF2Q96C03 454 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 REPS1Q96D71 796 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 GABRG3Q99928 467 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 C1QTNF2Q9BXJ5 285 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 REXO4Q9GZR2 422 aaKnown RBP17.83■□□□□ 0.45
HOXC11-201ENST00000243082 SPNS1Q9H2V7 528 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 WDR26Q9H7D7 661 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 FBXL12Q9NXK8 326 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 V9GYQ6 96 aa17.83■□□□□ 0.45
HOXC11-201ENST00000243082 TICRRQ7Z2Z1 1910 aa17.83■□□□□ 0.44
HOXC11-201ENST00000243082 ARHGAP10A1A4S6 786 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 ELOVL7A1L3X0 281 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 PIPSLA2A3N6 862 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 FOXE1O00358 373 aaPredicted RBP17.82■□□□□ 0.44
HOXC11-201ENST00000243082 KMOO15229 486 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 PI15O43692 258 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 MYO1DO94832 1006 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 FUCA1P04066 466 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 CDH1P12830 882 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 NTSR1P30989 418 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 GK3PQ14409 553 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 INTS11Q5TA45 600 aaKnown RBP17.82■□□□□ 0.44
HOXC11-201ENST00000243082 GCNT7Q6ZNI0 430 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 EP400NLQ6ZTU2 488 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 GBP5Q96PP8 586 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 NRTNQ99748 197 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 CENPKQ9BS16 269 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 TBCDQ9BTW9 1192 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 SLC6A17Q9H1V8 727 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 PDP2Q9P2J9 529 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 PCM1Q15154 2024 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 RFXANKO14593 260 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 LINGO3P0C6S8 592 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 LTBRP36941 435 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 MTHFRP42898 656 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 HTR4Q13639 388 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 ATP6AP1Q15904 470 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 SPIN4Q56A73 249 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 PAGE2BQ5JRK9 111 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 TNIP2Q8NFZ5 429 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 OR8J2Q8NGG1 315 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 OR5K2Q8NHB8 316 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 FIG4Q92562 907 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 CNBD2Q96M20 576 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 CHID1Q9BWS9 393 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 CXorf56Q9H5V9 222 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 CLDND1Q9NY35 253 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 ERVK-11Q9UQG0 969 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 BTBD3Q9Y2F9 522 aa17.82■□□□□ 0.44
HOXC11-201ENST00000243082 TDRKHQ9Y2W6 561 aaKnown RBP17.82■□□□□ 0.44
HOXC11-201ENST00000243082 CFAP20Q9Y6A4 193 aaKnown RBP17.82■□□□□ 0.44
HOXC11-201ENST00000243082 GPR89AB7ZAQ6 455 aa17.81■□□□□ 0.44
HOXC11-201ENST00000243082 PDLIM1O00151 329 aa17.81■□□□□ 0.44
HOXC11-201ENST00000243082 ACOX3O15254 700 aa17.81■□□□□ 0.44
HOXC11-201ENST00000243082 PLRG1O43660 514 aaKnown RBP17.81■□□□□ 0.44
HOXC11-201ENST00000243082 ADAM23O75077 832 aa17.81■□□□□ 0.44
HOXC11-201ENST00000243082 ANXA4P09525 319 aaPredicted RBP17.81■□□□□ 0.44
HOXC11-201ENST00000243082 GPR89BP0CG08 455 aa17.81■□□□□ 0.44
HOXC11-201ENST00000243082 ERGP11308 486 aa17.81■□□□□ 0.44
HOXC11-201ENST00000243082 COX7A2P14406 83 aa17.81■□□□□ 0.44
HOXC11-201ENST00000243082 TRPC1P48995 793 aa17.81■□□□□ 0.44
HOXC11-201ENST00000243082 RPS21P63220 83 aaKnown RBP17.81■□□□□ 0.44
HOXC11-201ENST00000243082 MEF2AQ02078 507 aaPredicted RBP17.81■□□□□ 0.44
HOXC11-201ENST00000243082 DUOXA1Q1HG43 343 aa17.81■□□□□ 0.44
HOXC11-201ENST00000243082 TMEM259Q4ZIN3 620 aa17.81■□□□□ 0.44
HOXC11-201ENST00000243082 C10orf62Q5T681 223 aaPredicted RBP17.81■□□□□ 0.44
HOXC11-201ENST00000243082 CAPRIN2Q6IMN6 1127 aaKnown RBP17.81■□□□□ 0.44
HOXC11-201ENST00000243082 LCTLQ6UWM7 567 aa17.81■□□□□ 0.44
HOXC11-201ENST00000243082 MICU2Q8IYU8 434 aa17.81■□□□□ 0.44
HOXC11-201ENST00000243082 CBR4Q8N4T8 237 aa17.81■□□□□ 0.44
HOXC11-201ENST00000243082 C2orf73Q8N5S3 287 aaPredicted RBP17.81■□□□□ 0.44
HOXC11-201ENST00000243082 IL17RCQ8NAC3 791 aa17.81■□□□□ 0.44
HOXC11-201ENST00000243082 GPR156Q8NFN8 814 aa17.81■□□□□ 0.44
HOXC11-201ENST00000243082 OR14C36Q8NHC7 312 aa17.81■□□□□ 0.44
HOXC11-201ENST00000243082 GANCQ8TET4 914 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms