RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 ADORA2AP29274 412 aa13.51□□□□□ -0.25
TARDBP-201ENST00000240185 YBEYP58557 167 aaPredicted RBP13.51□□□□□ -0.25
TARDBP-201ENST00000240185 FOXM1Q08050 763 aa13.51□□□□□ -0.25
TARDBP-201ENST00000240185 SLC13A2Q13183 592 aa13.51□□□□□ -0.25
TARDBP-201ENST00000240185 ZNF529Q6P280 563 aa13.51□□□□□ -0.25
TARDBP-201ENST00000240185 DRICH1Q6PGQ1 229 aaPredicted RBP13.51□□□□□ -0.25
TARDBP-201ENST00000240185 HFE2Q6ZVN8 426 aa13.51□□□□□ -0.25
TARDBP-201ENST00000240185 JPH3Q8WXH2 748 aaPredicted RBP13.51□□□□□ -0.25
TARDBP-201ENST00000240185 PYURFQ96I23 114 aa13.51□□□□□ -0.25
TARDBP-201ENST00000240185 SLC5A7Q9GZV3 580 aa13.51□□□□□ -0.25
TARDBP-201ENST00000240185 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.51□□□□□ -0.25
TARDBP-201ENST00000240185 MTG2Q9H4K7 406 aa13.51□□□□□ -0.25
TARDBP-201ENST00000240185 WDR6Q9NNW5 1121 aaKnown RBP13.51□□□□□ -0.25
TARDBP-201ENST00000240185 MGAT4CQ9UBM8 478 aa13.51□□□□□ -0.25
TARDBP-201ENST00000240185 USP31Q70CQ4 1352 aa13.51□□□□□ -0.25
TARDBP-201ENST00000240185 DUXAA6NLW8 204 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 MATN3O15232 486 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 EEF1E1O43324 174 aaKnown RBP13.5□□□□□ -0.25
TARDBP-201ENST00000240185 PROM1O43490 865 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 VIPP01282 170 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 ITGA5P08648 1049 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 PON3Q15166 354 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 GPRC6AQ5T6X5 926 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 Q8N402 240 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 SLC25A36Q96CQ1 311 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 TFB2MQ9H5Q4 396 aaKnown RBP13.5□□□□□ -0.25
TARDBP-201ENST00000240185 PAK1IP1Q9NWT1 392 aaPredicted RBP13.5□□□□□ -0.25
TARDBP-201ENST00000240185 DNAJC27Q9NZQ0 273 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 FKBPLQ9UIM3 349 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 MRPS23Q9Y3D9 190 aaKnown RBP13.5□□□□□ -0.25
TARDBP-201ENST00000240185 TBC1D3DA0A087WVF3 549 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 TBC1D3IA0A087WXS9 549 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 TBC1D3EA0A087X179 549 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 TBC1D3KA0A087X1G2 549 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 A0A1W2PQH9 124 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 TBC1D3FA6NER0 549 aaPredicted RBP13.5□□□□□ -0.25
TARDBP-201ENST00000240185 TBC1D3LB9A6J9 549 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 H3BSH0 61 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 SOX14O95416 240 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 TBC1D3HP0C7X1 549 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 SPATA31C1P0DKV0 1188 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 VEGFAP15692 232 aaPredicted RBP13.5□□□□□ -0.25
TARDBP-201ENST00000240185 UGT2B10P36537 528 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 NCBP2P52298 156 aaKnown RBP eCLIP13.5□□□□□ -0.251e-12■■■□□ 17.9
TARDBP-201ENST00000240185 SULT2A1Q06520 285 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 IKBKEQ14164 716 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 TBC1D3GQ6DHY5 549 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 TBC1D3CQ6IPX1 549 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 BEND4Q6ZU67 534 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 COMMD7Q86VX2 200 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 TBC1D3Q8IZP1 549 aaPredicted RBP13.5□□□□□ -0.25
TARDBP-201ENST00000240185 SCML4Q8N228 414 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 NDRG1Q92597 394 aaKnown RBP13.5□□□□□ -0.25
TARDBP-201ENST00000240185 OR10A4Q9H209 315 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 EVA1BQ9NVM1 165 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 GNG8Q9UK08 70 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 FAM170BA6NMN3 283 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 ZNF670-ZNF695F2Z2N8 137 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 ENPP3O14638 875 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 CRYZL1O95825 349 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 ZNF35P13682 527 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 ELK4P28324 431 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 HOXC12P31275 282 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 CREMQ03060 361 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 ITPK1Q13572 414 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 SLC2A7Q6PXP3 512 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 ANKRD13BQ86YJ7 626 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 SCGB1C1Q8TD33 95 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 GRHL3Q8TE85 626 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 TRUB1Q8WWH5 349 aaKnown RBP13.5□□□□□ -0.25
TARDBP-201ENST00000240185 LPPQ93052 612 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 HSD17B14Q9BPX1 270 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 ZIM2Q9NZV7 527 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 GLS2Q9UI32 602 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 VWDEQ8N2E2 1590 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 DIP2CQ9Y2E4 1556 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 FOXD2O60548 495 aaPredicted RBP13.5□□□□□ -0.25
TARDBP-201ENST00000240185 IFNA10P01566 189 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 BCKDHAP12694 445 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 HSD11B1P28845 292 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 HERV-K104P61576 105 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 ODF4Q2M2E3 257 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 CRTC1Q6UUV9 634 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 TSPAN33Q86UF1 283 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 LINC00471Q8N535 108 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 KCT2Q8NC54 265 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 OR5T2Q8NGG2 359 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 SMARCD2Q92925 531 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 TMEM41AQ96HV5 264 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 IKZF4Q9H2S9 585 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 P2RX2Q9UBL9 471 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 CD84Q9UIB8 345 aa13.5□□□□□ -0.25
TARDBP-201ENST00000240185 MEIS2O14770 477 aa13.49□□□□□ -0.25
TARDBP-201ENST00000240185 TMEM63AO94886 807 aa13.49□□□□□ -0.25
TARDBP-201ENST00000240185 MAPK3P27361 379 aaPredicted RBP13.49□□□□□ -0.25
TARDBP-201ENST00000240185 ENDOVQ8N8Q3 282 aaKnown RBP13.49□□□□□ -0.25
TARDBP-201ENST00000240185 OR10Q1Q8NGQ4 319 aa13.49□□□□□ -0.25
TARDBP-201ENST00000240185 OR5AK3PQ8NH89 298 aa13.49□□□□□ -0.25
TARDBP-201ENST00000240185 YIPF4Q9BSR8 244 aa13.49□□□□□ -0.25
TARDBP-201ENST00000240185 COLEC10Q9Y6Z7 277 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms