RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 KIAA1191Q96A73 305 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 ALKBH8Q96BT7 664 aaKnown RBP10.83□□□□□ -0.68
SF3B6-201ENST00000233468 ZNF501Q96CX3 271 aaPredicted RBP10.83□□□□□ -0.68
SF3B6-201ENST00000233468 C17orf62Q9BQA9 187 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 DPH2Q9BQC3 489 aaPredicted RBP10.83□□□□□ -0.68
SF3B6-201ENST00000233468 DPH7Q9BTV6 452 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 KLHL25Q9H0H3 589 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 APMAPQ9HDC9 416 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 ABCF3Q9NUQ8 709 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 EURLQ9NYK6 297 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 PSMC3IPQ9P2W1 217 aaPredicted RBP10.83□□□□□ -0.68
SF3B6-201ENST00000233468 PADI1Q9ULC6 663 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 SRPK3Q9UPE1 567 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 DYRK1BQ9Y463 629 aa10.83□□□□□ -0.68
SF3B6-201ENST00000233468 KIAA0754O94854 1291 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 KLHL2O95198 593 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 CD63P08962 238 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 RBP1P09455 135 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 EZRP15311 586 aaKnown RBP10.82□□□□□ -0.68
SF3B6-201ENST00000233468 PGGT1BP53609 377 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 ARSFP54793 590 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 VSNL1P62760 191 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 ABHD18Q0P651 414 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 GRM7Q14831 915 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 TGFBIQ15582 683 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 TGIF1Q15583 401 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 FAM214AQ32MH5 1076 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 PWWP2BQ6NUJ5 590 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 LCA5Q86VQ0 697 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 ZFAND4Q86XD8 727 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 DTX1Q86Y01 620 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 GSPT2Q8IYD1 628 aaKnown RBP10.82□□□□□ -0.68
SF3B6-201ENST00000233468 LRRC56Q8IYG6 542 aaPredicted RBP10.82□□□□□ -0.68
SF3B6-201ENST00000233468 ZNF655Q8N720 491 aaPredicted RBP10.82□□□□□ -0.68
SF3B6-201ENST00000233468 TTC29Q8NA56 475 aaPredicted RBP10.82□□□□□ -0.68
SF3B6-201ENST00000233468 PPFIBP2Q8ND30 876 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 OR56A3Q8NH54 315 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 RHEBL1Q8TAI7 183 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 DCAKDQ8WVC6 231 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 ISL2Q96A47 359 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 RERGQ96A58 199 aaPredicted RBP10.82□□□□□ -0.68
SF3B6-201ENST00000233468 CLIP3Q96DZ5 547 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 WBP1Q96G27 269 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 LRFN5Q96NI6 719 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 ZFYVE21Q9BQ24 234 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 SELENOSQ9BQE4 189 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 PLCD4Q9BRC7 762 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 NDC1Q9BTX1 674 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 SGPP1Q9BX95 441 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 NLNQ9BYT8 704 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 ATG10Q9H0Y0 220 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 VPS11Q9H270 941 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 ACTR5Q9H9F9 607 aaPredicted RBP10.82□□□□□ -0.68
SF3B6-201ENST00000233468 PRDM9Q9NQV7 894 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 TMEM184CQ9NVA4 438 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 NUDT4Q9NZJ9 180 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 CD274Q9NZQ7 290 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 PILRAQ9UKJ1 303 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 TMCO1Q9UM00 188 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 KCNE2Q9Y6J6 123 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 NAV2Q8IVL1 2488 aa10.82□□□□□ -0.68
SF3B6-201ENST00000233468 ZFC3H1O60293 1989 aaKnown RBP10.81□□□□□ -0.68
SF3B6-201ENST00000233468 OR2A25A4D2G3 310 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 KRT87PA6NCN2 255 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 B8ZZF3 427 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 TRIM49D1C9J1S8 452 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 ZSCAN9O15535 394 aaPredicted RBP10.81□□□□□ -0.68
SF3B6-201ENST00000233468 KERAO60938 352 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 DLGAP3O95886 979 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 ALDOAP04075 364 aaKnown RBP10.81□□□□□ -0.68
SF3B6-201ENST00000233468 MYBL2P10244 700 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 TFEBP19484 476 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 AGXTP21549 392 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 CXCR2P25025 360 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 PSMB5P28074 263 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 CCR8P51685 355 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 ZIC1Q15915 447 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 ERCC6LQ2NKX8 1250 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 FCRL6Q6DN72 434 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 CCDC81Q6ZN84 652 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 TIFABQ6ZNK6 161 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 ISCA2Q86U28 154 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 FAM20CQ8IXL6 584 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 SPATA6LQ8N4H0 392 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 EXD3Q8N9H8 876 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 OR1L3Q8NH93 324 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 PROKR1Q8TCW9 393 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 ACMSDQ8TDX5 336 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 NKD1Q969G9 470 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 PMEPA1Q969W9 287 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 CCNL2Q96S94 520 aaPredicted RBP10.81□□□□□ -0.68
SF3B6-201ENST00000233468 DHRS4Q9BTZ2 278 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 PARD6BQ9BYG5 372 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 ALG9Q9H6U8 611 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 FAM60AQ9NP50 221 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 TXLNGQ9NUQ3 528 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 WWOXQ9NZC7 414 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 KCND3Q9UK17 655 aa10.81□□□□□ -0.68
SF3B6-201ENST00000233468 HMX2A2RU54 273 aa10.8□□□□□ -0.68
SF3B6-201ENST00000233468 NCF1BA6NI72 391 aaPredicted RBP10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms