RNA–Protein interactions for RNA: ENST00000229265.10

CDCA3-201, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-201ENST00000229265 ZNF776Q68DI1 518 aaPredicted RBP10.32□□□□□ -0.76
CDCA3-201ENST00000229265 RAET1GQ6H3X3 334 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 GRHL2Q6ISB3 625 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 LCN8Q6JVE9 175 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 IRGCQ6NXR0 463 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 USP30Q70CQ3 517 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 DET1Q7L5Y6 550 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 RETREG3Q86VR2 466 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 AMZ2Q86W34 360 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 VRK3Q8IV63 474 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 CFAP206Q8IYR0 622 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 PAPD5Q8NDF8 572 aaKnown RBP10.32□□□□□ -0.76
CDCA3-201ENST00000229265 WDR20Q8TBZ3 569 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 NRG4Q8WWG1 115 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 CCDC97Q96F63 343 aaPredicted RBP10.32□□□□□ -0.76
CDCA3-201ENST00000229265 SLC45A3Q96JT2 553 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 MARK4Q96L34 752 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 CNTNAP3BQ96NU0 1288 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 CAMK1GQ96NX5 476 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 CDK15Q96Q40 435 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 HAUS8Q9BT25 410 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 SGPP1Q9BX95 441 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 C1QTNF2Q9BXJ5 285 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 CNTNAP3Q9BZ76 1288 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 VCXQ9H320 206 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 CLMPQ9H6B4 373 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 NT5DC2Q9H857 520 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 CCM2LQ9NUG4 571 aaPredicted RBP10.32□□□□□ -0.76
CDCA3-201ENST00000229265 USP36Q9P275 1121 aaKnown RBP10.32□□□□□ -0.76
CDCA3-201ENST00000229265 STOX2Q9P2F5 926 aaPredicted RBP10.32□□□□□ -0.76
CDCA3-201ENST00000229265 ATXN10Q9UBB4 475 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 VPS29Q9UBQ0 182 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 MCM8Q9UJA3 840 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 PILRBQ9UKJ0 227 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 FZD4Q9ULV1 537 aa10.32□□□□□ -0.76
CDCA3-201ENST00000229265 OR2AG2A6NM03 316 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 ARHGEF33A8MVX0 844 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 NR5A2O00482 541 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 GMNNO75496 209 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 PDYNP01213 254 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 DDX5P17844 614 aaKnown RBP10.31□□□□□ -0.76
CDCA3-201ENST00000229265 IL1RNP18510 177 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 CXCR2P25025 360 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 DRD3P35462 400 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 RPL3P39023 403 aaKnown RBP10.31□□□□□ -0.76
CDCA3-201ENST00000229265 PIK3CBP42338 1070 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 GSTM5P46439 218 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 ASMTP46597 345 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 GTF2A1P52655 376 aaPredicted RBP10.31□□□□□ -0.76
CDCA3-201ENST00000229265 CTSCP53634 463 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 RPS14P62263 151 aaKnown RBP10.31□□□□□ -0.76
CDCA3-201ENST00000229265 MRPS35P82673 323 aaKnown RBP10.31□□□□□ -0.76
CDCA3-201ENST00000229265 CNTN1Q12860 1018 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 CHIT1Q13231 466 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 SGCGQ13326 291 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 STARD3Q14849 445 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 MAPKAPK3Q16644 382 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 ZXDCQ2QGD7 858 aaPredicted RBP10.31□□□□□ -0.76
CDCA3-201ENST00000229265 PEAR1Q5VY43 1037 aaPredicted RBP10.31□□□□□ -0.76
CDCA3-201ENST00000229265 ATG9BQ674R7 924 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 NANOGP8Q6NSW7 305 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 GALNT18Q6P9A2 607 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 KIAA1324Q6UXG2 1013 aaKnown RBP10.31□□□□□ -0.76
CDCA3-201ENST00000229265 DLEU7Q6UYE1 221 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 FAM124AQ86V42 546 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 LRRTM4Q86VH4 590 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 MARCH9Q86YJ5 346 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 RAB42Q8N4Z0 105 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 SNX31Q8N9S9 440 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 BHLHE22Q8NFJ8 381 aaPredicted RBP10.31□□□□□ -0.76
CDCA3-201ENST00000229265 OR2T34Q8NGX1 318 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 C1orf216Q8TAB5 229 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 TMEM125Q96AQ2 219 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 CXorf40BQ96DE9 158 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 PKP4Q99569 1192 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 PRPF18Q99633 342 aaKnown RBP10.31□□□□□ -0.76
CDCA3-201ENST00000229265 ECSITQ9BQ95 431 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 WRAP53Q9BUR4 548 aaKnown RBP10.31□□□□□ -0.76
CDCA3-201ENST00000229265 EDEM2Q9BV94 578 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 OR2AG1Q9H205 316 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 Q9H521 79 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 YY1AP1Q9H869 796 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 GORASP2Q9H8Y8 452 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 NANOGQ9H9S0 305 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 PREBQ9HCU5 417 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 INTS7Q9NVH2 962 aaKnown RBP10.31□□□□□ -0.76
CDCA3-201ENST00000229265 SPATA7Q9P0W8 599 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 CDV3Q9UKY7 258 aaKnown RBP10.31□□□□□ -0.76
CDCA3-201ENST00000229265 RAB23Q9ULC3 237 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 RAB26Q9ULW5 256 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 NCKAP1Q9Y2A7 1128 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 MAN2B2Q9Y2E5 1009 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 PCDHB3Q9Y5E6 796 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 DMXL2Q8TDJ6 3036 aa10.31□□□□□ -0.76
CDCA3-201ENST00000229265 PCNX2A6NKB5 2137 aa10.3□□□□□ -0.76
CDCA3-201ENST00000229265 FXYD1O00168 92 aa10.3□□□□□ -0.76
CDCA3-201ENST00000229265 DENRO43583 198 aaKnown RBP10.3□□□□□ -0.76
CDCA3-201ENST00000229265 C1GALT1C1LP0DN25 315 aa10.3□□□□□ -0.76
CDCA3-201ENST00000229265 PIM1P11309 404 aaPredicted RBP10.3□□□□□ -0.76
CDCA3-201ENST00000229265 BMP2P12643 396 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms