RNA–Protein interactions for RNA: ENST00000226225.6

TNFAIP1-201, Transcript of TNF alpha induced protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP1, Length 3,627 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-201ENST00000226225 MILR1Q7Z6M3 343 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 HS3ST5Q8IZT8 346 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 CDC26Q8NHZ8 85 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 CAPSLQ8WWF8 208 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 ITCHQ96J02 903 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 C1orf50Q9BV19 199 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 POPDC3Q9HBV1 291 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 PRDM8Q9NQV8 689 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 SLAMF8Q9P0V8 285 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 SPATA7Q9P0W8 599 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 TMPRSS11EQ9UL52 423 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 TRPM6Q9BX84 2022 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 CXorf51AA0A1B0GTR3 108 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 ARNTLO00327 626 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 KPNA5O15131 536 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 ARPC2O15144 300 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 CNOT3O75175 753 aaKnown RBP11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 NFYCQ13952 458 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 NFE2L1Q14494 772 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 ZNF678Q5SXM1 525 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 AGBL4Q5VU57 503 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 PCYOX1LQ8NBM8 494 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 OR56A4Q8NGH8 313 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 MRGPRX1Q96LB2 322 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 CCM2Q9BSQ5 444 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 LGR4Q9BXB1 951 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 RAD21L1Q9H4I0 556 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 ZNF385DQ9H6B1 395 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 IPPKQ9H8X2 491 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 AASDHPPTQ9NRN7 309 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 SMPD3Q9NY59 655 aaPredicted RBP11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 PSMD11O00231 422 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 CACNB4O00305 520 aaPredicted RBP11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 WDR47O94967 919 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 SEPHS1P49903 392 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 SPCS2Q15005 226 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 MOGQ16653 247 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 AMZ2Q86W34 360 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 FRMD1Q8N878 549 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 ATOH8Q96SQ7 321 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 C9orf16Q9BUW7 83 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 TRIM39Q9HCM9 518 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 MRPL40Q9NQ50 206 aaKnown RBP11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 IMP3Q9NV31 184 aaKnown RBP11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 U3KQV3 271 aa11.36□□□□□ -0.59
TNFAIP1-201ENST00000226225 LRRC72A6NJI9 287 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 QSOX1O00391 747 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 IFRD1O00458 451 aaPredicted RBP11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 OR4F21O95013 312 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 ALDOCP09972 364 aaKnown RBP11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 SRFP11831 508 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 ZNF8P17098 575 aaPredicted RBP11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 NDUFV2P19404 249 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 TCEA1P23193 301 aaKnown RBP11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 NAE1Q13564 534 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 FBXO43Q4G163 708 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 UNC50Q53HI1 259 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 TMEM236Q5W0B7 351 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 ENPP7Q6UWV6 458 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 OR10Q1Q8NGQ4 319 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 GPR174Q9BXC1 333 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 HDAC8Q9BY41 377 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 AKTIPQ9H8T0 292 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 TM7SF3Q9NS93 570 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 CNOT11Q9UKZ1 510 aaKnown RBP11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 MRPS17Q9Y2R5 130 aaKnown RBP11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 TMEM265A0A087WTH1 108 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 H0Y8X5 98 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 NPC1O15118 1278 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 EPB42P16452 691 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 CAPN3P20807 821 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 RPS3P23396 243 aaKnown RBP eCLIP11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 MYF6P23409 242 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 BDKRB1P46663 353 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 FOXA1P55317 472 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 MLF2Q15773 248 aaPredicted RBP11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 ZNF542PQ5EBM4 170 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 PNCKQ6P2M8 343 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 NRSN1Q8IZ57 195 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 FAM160A2Q8N612 972 aaPredicted RBP11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 RHEBL1Q8TAI7 183 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 GLMNQ92990 594 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 KLQ9UEF7 1012 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 TRBV5-4A0A0C4DH59 114 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 H0Y858 1186 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 AZIN1O14977 448 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 STK16O75716 305 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 PRDX3P30048 256 aaKnown RBP11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 SHMT2P34897 504 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 CAPGP40121 348 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 GNPDA1P46926 289 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 DIO3P55073 304 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 MRPS21P82921 87 aaKnown RBP11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 HERC3Q15034 1050 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 IRF4Q15306 451 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 MEP1AQ16819 746 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 SLC36A3Q495N2 470 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 NIPAL1Q6NVV3 410 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 IL27RAQ6UWB1 636 aa11.35□□□□□ -0.59
TNFAIP1-201ENST00000226225 ADCK2Q7Z695 626 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms