RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 ZKSCAN8Q15776 578 aaPredicted RBP17.27■□□□□ 0.36
PFN1-201ENST00000225655 CLEC18BQ6UXF7 455 aa17.27■□□□□ 0.36
PFN1-201ENST00000225655 CROCCP2Q86T23 111 aa17.27■□□□□ 0.36
PFN1-201ENST00000225655 RAB43Q86YS6 212 aa17.27■□□□□ 0.36
PFN1-201ENST00000225655 LINC01555Q8NAE3 123 aa17.27■□□□□ 0.36
PFN1-201ENST00000225655 CLEC18CQ8NCF0 446 aa17.27■□□□□ 0.36
PFN1-201ENST00000225655 EEF1AKMT1Q8WVE0 214 aa17.27■□□□□ 0.36
PFN1-201ENST00000225655 ANKRD7Q92527 254 aa17.27■□□□□ 0.36
PFN1-201ENST00000225655 RAD51AP1Q96B01 352 aa17.27■□□□□ 0.36
PFN1-201ENST00000225655 SLC22A18Q96BI1 424 aa17.27■□□□□ 0.36
PFN1-201ENST00000225655 CABS1Q96KC9 395 aa17.27■□□□□ 0.36
PFN1-201ENST00000225655 SLC30A3Q99726 388 aa17.27■□□□□ 0.36
PFN1-201ENST00000225655 G3BP2Q9UN86 482 aaKnown RBP17.27■□□□□ 0.36
PFN1-201ENST00000225655 ACOT9Q9Y305 439 aa17.27■□□□□ 0.36
PFN1-201ENST00000225655 ZNF451Q9Y4E5 1061 aa17.27■□□□□ 0.36
PFN1-201ENST00000225655 LRRK2Q5S007 2527 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 ZNF839A8K0R7 811 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 RASGRF2O14827 1237 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 SLC16A5O15375 505 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 PHGDHO43175 533 aaKnown RBP17.26■□□□□ 0.35
PFN1-201ENST00000225655 CDH16O75309 829 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 MATN4O95460 622 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 CTSBP07858 339 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 CD63P08962 238 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 HIST1H2AGP0C0S8 130 aaPredicted RBP17.26■□□□□ 0.35
PFN1-201ENST00000225655 HIST1H2ADP20671 130 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 MAGP20916 626 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 ATP6V0D1P61421 351 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 DCDP81605 110 aaKnown RBP17.26■□□□□ 0.35
PFN1-201ENST00000225655 ATP1A4Q13733 1029 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 C1orf189Q5VU69 101 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 KLC3Q6P597 504 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 PIWIL4Q7Z3Z4 852 aaKnown RBP17.26■□□□□ 0.35
PFN1-201ENST00000225655 ATCAYQ86WG3 371 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 HPS6Q86YV9 775 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 CEP97Q8IW35 865 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 RIBC1Q8N443 379 aaPredicted RBP17.26■□□□□ 0.35
PFN1-201ENST00000225655 ZNF655Q8N720 491 aaPredicted RBP17.26■□□□□ 0.35
PFN1-201ENST00000225655 FDCSPQ8NFU4 85 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 OR2L8Q8NGY9 312 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 MCOLN3Q8TDD5 553 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 PDLIM5Q96HC4 596 aaKnown RBP17.26■□□□□ 0.35
PFN1-201ENST00000225655 HIST1H2AHQ96KK5 128 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 IP6K3Q96PC2 410 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 HIST1H2AJQ99878 128 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 H2AFJQ9BTM1 129 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 ROPN1BQ9BZX4 212 aaPredicted RBP17.26■□□□□ 0.35
PFN1-201ENST00000225655 ROPN1Q9HAT0 212 aaPredicted RBP17.26■□□□□ 0.35
PFN1-201ENST00000225655 SNX15Q9NRS6 342 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 TXLNGQ9NUQ3 528 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 EURLQ9NYK6 297 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 GPN3Q9UHW5 284 aaPredicted RBP17.26■□□□□ 0.35
PFN1-201ENST00000225655 PCSK5Q92824 1860 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 CCDC88CQ9P219 2028 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 MAST4O15021 2626 aa17.26■□□□□ 0.35
PFN1-201ENST00000225655 SMIM23A6NLE4 172 aa17.25■□□□□ 0.35
PFN1-201ENST00000225655 TRIM49D1C9J1S8 452 aa17.25■□□□□ 0.35
PFN1-201ENST00000225655 PSIP1O75475 530 aaKnown RBP17.25■□□□□ 0.35
PFN1-201ENST00000225655 SHBGP04278 402 aa17.25■□□□□ 0.35
PFN1-201ENST00000225655 HSD17B2P37059 387 aa17.25■□□□□ 0.35
PFN1-201ENST00000225655 TIAL1Q01085 375 aaKnown RBP eCLIP17.25■□□□□ 0.356e-31■■■■■ 49.2
PFN1-201ENST00000225655 SSPNQ14714 243 aa17.25■□□□□ 0.35
PFN1-201ENST00000225655 RASA2Q15283 850 aa17.25■□□□□ 0.35
PFN1-201ENST00000225655 NKAIN1Q4KMZ8 207 aa17.25■□□□□ 0.35
PFN1-201ENST00000225655 MLIPQ5VWP3 458 aa17.25■□□□□ 0.35
PFN1-201ENST00000225655 UBE2R2Q712K3 238 aaPredicted RBP17.25■□□□□ 0.35
PFN1-201ENST00000225655 CMC1Q7Z7K0 106 aa17.25■□□□□ 0.35
PFN1-201ENST00000225655 TDRPQ86YL5 185 aa17.25■□□□□ 0.35
PFN1-201ENST00000225655 FAM20CQ8IXL6 584 aa17.25■□□□□ 0.35
PFN1-201ENST00000225655 ASB11Q8WXH4 323 aa17.25■□□□□ 0.35
PFN1-201ENST00000225655 COL26A1Q96A83 441 aa17.25■□□□□ 0.35
PFN1-201ENST00000225655 IL17FQ96PD4 163 aa17.25■□□□□ 0.35
PFN1-201ENST00000225655 NDC1Q9BTX1 674 aa17.25■□□□□ 0.35
PFN1-201ENST00000225655 IRAK4Q9NWZ3 460 aa17.25■□□□□ 0.35
PFN1-201ENST00000225655 IFT80Q9P2H3 777 aaPredicted RBP17.25■□□□□ 0.35
PFN1-201ENST00000225655 DHCR7Q9UBM7 475 aaKnown RBP17.25■□□□□ 0.35
PFN1-201ENST00000225655 CTNNAL1Q9UBT7 734 aa17.25■□□□□ 0.35
PFN1-201ENST00000225655 A0A096LPK6 155 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 TLDC2A0PJX2 215 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 TTLL8A6PVC2 850 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 C1orf105O95561 183 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 ENO2P09104 434 aaPredicted RBP17.24■□□□□ 0.35
PFN1-201ENST00000225655 CCDC166P0CW27 439 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 KRT15P19012 456 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 OTX2P32243 289 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 FOLR3P41439 243 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 SLCO1A2P46721 670 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 GCGRP47871 477 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 ZNF460Q14592 562 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 FAM83EQ2M2I3 478 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 NADK2Q4G0N4 442 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 MRPL14Q6P1L8 145 aaKnown RBP17.24■□□□□ 0.35
PFN1-201ENST00000225655 FRA10AC1Q70Z53 315 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 MRGPREQ86SM8 312 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 ADAMTSL2Q86TH1 951 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 MCATQ8IVS2 390 aaKnown RBP17.24■□□□□ 0.35
PFN1-201ENST00000225655 FBXO15Q8NCQ5 510 aaPredicted RBP17.24■□□□□ 0.35
PFN1-201ENST00000225655 OR2Y1Q8NGV0 311 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 NUDT9Q9BW91 350 aa17.24■□□□□ 0.35
PFN1-201ENST00000225655 DERL2Q9GZP9 239 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms