RNA–Protein interactions for RNA: ENST00000225519.3

SHPK-201, Transcript of sedoheptulokinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHPK, Length 3,838 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPK-201ENST00000225519 TSPAN12O95859 305 aa13.81□□□□□ -0.2
SHPK-201ENST00000225519 SMIM10L2AP0DMW4 78 aa13.81□□□□□ -0.2
SHPK-201ENST00000225519 SMIM10L2BP0DMW5 78 aa13.81□□□□□ -0.2
SHPK-201ENST00000225519 ENGP17813 658 aa13.81□□□□□ -0.2
SHPK-201ENST00000225519 LPOP22079 712 aaPredicted RBP13.81□□□□□ -0.2
SHPK-201ENST00000225519 MAGEA2P43356 314 aa13.81□□□□□ -0.2
SHPK-201ENST00000225519 RGS4P49798 205 aa13.81□□□□□ -0.2
SHPK-201ENST00000225519 C3orf58Q8NDZ4 430 aa13.81□□□□□ -0.2
SHPK-201ENST00000225519 HRASLS5Q96KN8 279 aa13.81□□□□□ -0.2
SHPK-201ENST00000225519 FEVQ99581 238 aa13.81□□□□□ -0.2
SHPK-201ENST00000225519 MROH8Q9H579 483 aa13.81□□□□□ -0.2
SHPK-201ENST00000225519 MS4A12Q9NXJ0 267 aa13.81□□□□□ -0.2
SHPK-201ENST00000225519 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.81□□□□□ -0.2
SHPK-201ENST00000225519 IGLV3-25P01717 112 aa13.81□□□□□ -0.2
SHPK-201ENST00000225519 POU2F1P14859 743 aa13.81□□□□□ -0.2
SHPK-201ENST00000225519 OR3A3P47888 321 aa13.81□□□□□ -0.2
SHPK-201ENST00000225519 VMACQ2NL98 169 aa13.81□□□□□ -0.2
SHPK-201ENST00000225519 VANGL1Q8TAA9 524 aaPredicted RBP13.81□□□□□ -0.2
SHPK-201ENST00000225519 TRPM4Q8TD43 1214 aa13.81□□□□□ -0.2
SHPK-201ENST00000225519 FRMD6Q96NE9 622 aa13.81□□□□□ -0.2
SHPK-201ENST00000225519 PAAF1Q9BRP4 392 aa13.81□□□□□ -0.2
SHPK-201ENST00000225519 CINPQ9BW66 212 aaPredicted RBP13.81□□□□□ -0.2
SHPK-201ENST00000225519 MKRN2Q9H000 416 aaKnown RBP13.81□□□□□ -0.2
SHPK-201ENST00000225519 ABI2Q9NYB9 513 aaPredicted RBP13.81□□□□□ -0.2
SHPK-201ENST00000225519 ZNF236Q9UL36 1845 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 LOC730098B7Z3J9 87 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 H3BM21 787 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 UGT2B17O75795 530 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 MMP3P08254 477 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 BNC1Q01954 994 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 FAM217AQ8IXS0 508 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 SPERTQ8NA61 448 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 NELL1Q92832 810 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 CRELD1Q96HD1 420 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 OR5M11Q96RB7 305 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 ELOVL6Q9H5J4 265 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 CSNK1G1Q9HCP0 422 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 ACTL7AQ9Y615 435 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 HAS3O00219 553 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 GFRA2O00451 464 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 TNFRSF21O75509 655 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 IL1RNP18510 177 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 GGT2P36268 569 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.8□□□□□ -0.2
SHPK-201ENST00000225519 PCBP2Q15366 365 aaKnown RBP eCLIP13.8□□□□□ -0.24e-6■■■□□ 15.9
SHPK-201ENST00000225519 EIF3MQ7L2H7 374 aaKnown RBP13.8□□□□□ -0.2
SHPK-201ENST00000225519 CALHM3Q86XJ0 350 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 DNAJB8Q8NHS0 232 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 SDHCQ99643 169 aaPredicted RBP13.8□□□□□ -0.2
SHPK-201ENST00000225519 FAM126AQ9BYI3 521 aaPredicted RBP13.8□□□□□ -0.2
SHPK-201ENST00000225519 ARIH1Q9Y4X5 557 aaPredicted RBP13.8□□□□□ -0.2
SHPK-201ENST00000225519 PCDHGB3Q9Y5G1 929 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 BPTFQ12830 3046 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 PLXNA1Q9UIW2 1896 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 A0A0U1RQS6 177 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 FPGTO14772 594 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 GPR39O43194 453 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 SUV39H1O43463 412 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 ESR1P03372 595 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 EPB42P16452 691 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 KIR3DL1P43629 444 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 PCBP1Q15365 356 aaKnown RBP eCLIP13.8□□□□□ -0.2
SHPK-201ENST00000225519 BAK1Q16611 211 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 PYDC2Q56P42 97 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 MS4A13Q5J8X5 152 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 FBXL22Q6P050 247 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 PLET1Q6UQ28 207 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 DPY19L3Q6ZPD9 716 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 THEM5Q8N1Q8 247 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 FAM109AQ8N4B1 249 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 HCAR2Q8TDS4 363 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 SKA2Q8WVK7 121 aaPredicted RBP13.8□□□□□ -0.2
SHPK-201ENST00000225519 IGSF8Q969P0 613 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 PITX2Q99697 317 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 DLGAP4Q9Y2H0 992 aa13.8□□□□□ -0.2
SHPK-201ENST00000225519 MANBAO00462 879 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 ARHGAP33O14559 1287 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 GLUD1P00367 558 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 EPOP01588 193 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 FHP07954 510 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 TSPAN19P0C672 248 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 CTSL3PQ5NE16 218 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 SCD5Q86SK9 330 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 IQCF2Q8IXL9 164 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 CACTIN-AS1Q8N1I8 211 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 TP53I13Q8NBR0 393 aaPredicted RBP13.79□□□□□ -0.2
SHPK-201ENST00000225519 OR10G2Q8NGC3 310 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 COQ8BQ96D53 544 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 APOLD1Q96LR9 279 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 RIPOR3Q96MK2 946 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 TMEM248Q9NWD8 314 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 TSC2P49815 1807 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 SCAMP3O14828 347 aaKnown RBP13.79□□□□□ -0.2
SHPK-201ENST00000225519 SLC14A1Q13336 389 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 NFE2Q16621 373 aaPredicted RBP13.79□□□□□ -0.2
SHPK-201ENST00000225519 BTBD16Q32M84 506 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 YIF1BQ5BJH7 314 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 Q5BKY6 102 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 XKR4Q5GH76 650 aa13.79□□□□□ -0.2
SHPK-201ENST00000225519 RGMBQ6NW40 437 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms