RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 ZC3H12BQ5HYM0 836 aaKnown RBP13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 CDKL4Q5MAI5 379 aa13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 WASHC2DQ5SRD0 308 aa13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 PRAMEF9Q5VWM5 478 aa13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 C16orf46Q6P387 395 aa13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 FAM199XQ6PEV8 388 aaPredicted RBP13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 C6orf15Q6UXA7 325 aaPredicted RBP13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 RNF44Q7L0R7 432 aa13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 VASH2Q86V25 355 aa13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 KLHDC8AQ8IYD2 350 aa13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 ZNF655Q8N720 491 aaPredicted RBP13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 PDPRQ8NCN5 879 aa13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 ZNF740Q8NDX6 193 aa13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 SCYL1Q96KG9 808 aa13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 ZNF285Q96NJ3 590 aa13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 OR2A5Q96R48 311 aa13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 SELENOSQ9BQE4 189 aa13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 HAUS8Q9BT25 410 aa13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 FANCEQ9HB96 536 aa13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 WWOXQ9NZC7 414 aa13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 TMEM216Q9P0N5 145 aa13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 PLAAQ9Y263 795 aa13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 SSUH2Q9Y2M2 353 aa13.79□□□□□ -0.2
SUPT4H1-201ENST00000225504 MDC1Q14676 2089 aaKnown RBP13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 A0A087WV48 116 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 LOC101059948A0A1B0GTJ6 334 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 E7EQ34 232 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 MED26O95402 600 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 EIF2S1P05198 315 aaKnown RBP13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 TUBBP07437 444 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 WT1P19544 449 aaPredicted RBP13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 SNRPNP63162 240 aaKnown RBP13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 RASA2Q15283 850 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 KLC3Q6P597 504 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 CYB5D1Q6P9G0 228 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 GPR135Q8IZ08 494 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 CACNA2D3Q8IZS8 1091 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 NLGN4XQ8N0W4 816 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 DTWD1Q8N5C7 304 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 ABHD11Q8NFV4 315 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 NLGN4YQ8NFZ3 816 aaPredicted RBP13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 OR4K1Q8NGD4 311 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 HNRNPLLQ8WVV9 542 aaKnown RBP13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 ZFYVE21Q9BQ24 234 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 MACROD1Q9BQ69 325 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 CD244Q9BZW8 370 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 SPNS1Q9H2V7 528 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 NUDT4Q9NZJ9 180 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 CPSF2Q9P2I0 782 aaKnown RBP13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 ANKMY1Q9P2S6 941 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 PCDHB3Q9Y5E6 796 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 USP24Q9UPU5 2620 aa13.78□□□□□ -0.2
SUPT4H1-201ENST00000225504 RRP8O43159 456 aaKnown RBP13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 KLK8O60259 260 aa13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 CCNT2O60583 730 aaKnown RBP13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 SRPX2O60687 465 aaPredicted RBP13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 STK16O75716 305 aa13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 S100BP04271 92 aaPredicted RBP13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 ATXN8OSP0DMR3 200 aa13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 EPORP19235 508 aa13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 VARSP26640 1264 aaKnown RBP13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 GCGRP47871 477 aa13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 PFKFB4Q16877 469 aa13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 TCAIMQ8N3R3 496 aa13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 SLC5A11Q8WWX8 675 aa13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 CLIP3Q96DZ5 547 aa13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 CRELD1Q96HD1 420 aa13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 RUFY1Q96T51 708 aa13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 DPH1Q9BZG8 443 aa13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 ACTR5Q9H9F9 607 aaPredicted RBP13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 IRAK4Q9NWZ3 460 aa13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 XPR1Q9UBH6 696 aa13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 DHCR7Q9UBM7 475 aaKnown RBP13.77□□□□□ -0.21
SUPT4H1-201ENST00000225504 TK2O00142 265 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 MEN1O00255 615 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 ZSCAN9O15535 394 aaPredicted RBP13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 CPNE3O75131 537 aaKnown RBP13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 CDH16O75309 829 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 SIX3O95343 332 aaPredicted RBP13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 RBP1P09455 135 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 EZRP15311 586 aaKnown RBP13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 KRT15P19012 456 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 F8A1P23610 371 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 HRH2P25021 359 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 RORAP35398 523 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 BCL6P41182 706 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 CCR8P51685 355 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 RELAQ04206 551 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 TLE3Q04726 772 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 IFFO1Q0D2I5 559 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 NAA25Q14CX7 972 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 TSNAXIP1Q2TAA8 658 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 HKDC1Q2TB90 917 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 C1orf189Q5VU69 101 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 TLDC1Q6P9B6 456 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 C19orf48Q6RUI8 117 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 NXPE4Q6UWF7 544 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 SLCO4C1Q6ZQN7 724 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 VN1R4Q7Z5H5 301 aa13.76□□□□□ -0.21
SUPT4H1-201ENST00000225504 IQCKQ8N0W5 287 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms