RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 IGSF5Q9NSI5 407 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 TXLNGQ9NUQ3 528 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 NDOR1Q9UHB4 597 aa12.13□□□□□ -0.47
LSM5-201ENST00000223084 FARSAQ9Y285 508 aaKnown RBP12.13□□□□□ -0.47
LSM5-201ENST00000223084 A0A087WUV0 522 aaPredicted RBP12.12□□□□□ -0.47
LSM5-201ENST00000223084 C21orf140B9A014 251 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 SRPX2O60687 465 aaPredicted RBP12.12□□□□□ -0.47
LSM5-201ENST00000223084 C2P06681 752 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 CAPN1P07384 714 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 INHBAP08476 426 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 ANXA5P08758 320 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 FURINP09958 794 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 CCND1P24385 295 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 PTPN4P29074 926 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 CRABP2P29373 138 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 KCNC1P48547 511 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 FOXL2P58012 376 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 ATP6V0D1P61421 351 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 RPS15P62841 145 aaKnown RBP12.12□□□□□ -0.47
LSM5-201ENST00000223084 CSNK1G2P78368 415 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 CDKL1Q00532 357 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 MEF2AQ02078 507 aaPredicted RBP12.12□□□□□ -0.47
LSM5-201ENST00000223084 CDC20Q12834 499 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 ERV3-1Q14264 604 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 GRM7Q14831 915 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 TCTE1Q5JU00 501 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 PCSK4Q6UW60 755 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 C17orf64Q86WR6 236 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 GPSM1Q86YR5 675 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 METTL27Q8N6F8 245 aaPredicted RBP12.12□□□□□ -0.47
LSM5-201ENST00000223084 ENDOVQ8N8Q3 282 aaKnown RBP12.12□□□□□ -0.47
LSM5-201ENST00000223084 TTC29Q8NA56 475 aaPredicted RBP12.12□□□□□ -0.47
LSM5-201ENST00000223084 DCAKDQ8WVC6 231 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 KCTD4Q8WVF5 259 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.12□□□□□ -0.47
LSM5-201ENST00000223084 TTC9Q92623 222 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 EXT2Q93063 718 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 KIAA1191Q96A73 305 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 RHBDF1Q96CC6 855 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 NXNL1Q96CM4 212 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 TSNARE1Q96NA8 513 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 BBC3Q96PG8 261 aaPredicted RBP12.12□□□□□ -0.47
LSM5-201ENST00000223084 OR2A5Q96R48 311 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 TXLNGYQ9BZA5 131 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 PCBD2Q9H0N5 130 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 ALG9Q9H6U8 611 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 SNX15Q9NRS6 342 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 CUTCQ9NTM9 273 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 TMEM184CQ9NVA4 438 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 KCND3Q9UK17 655 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 SRPK3Q9UPE1 567 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 PCDHGA6Q9Y5G7 932 aa12.12□□□□□ -0.47
LSM5-201ENST00000223084 FEZF1A0PJY2 475 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 HYKKA2RU49 373 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 CDC14CA4D256 554 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 FITM1A5D6W6 292 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 P2RX6O15547 441 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 RIPK2O43353 540 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 LCMT2O60294 686 aaKnown RBP12.11□□□□□ -0.47
LSM5-201ENST00000223084 CREG1O75629 220 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 ALDOAP04075 364 aaKnown RBP12.11□□□□□ -0.47
LSM5-201ENST00000223084 LTA4HP09960 611 aaKnown RBP12.11□□□□□ -0.47
LSM5-201ENST00000223084 EZRP15311 586 aaKnown RBP12.11□□□□□ -0.47
LSM5-201ENST00000223084 TFEBP19484 476 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 ITGAXP20702 1163 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 AGXTP21549 392 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 GDF5P43026 501 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 MSH2P43246 934 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 CSRP3P50461 194 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 ARSFP54793 590 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 SNRPNP63162 240 aaKnown RBP12.11□□□□□ -0.47
LSM5-201ENST00000223084 DCDP81605 110 aaKnown RBP12.11□□□□□ -0.47
LSM5-201ENST00000223084 RHDQ02161 417 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 TGFBIQ15582 683 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 TBR1Q16650 682 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 HKDC1Q2TB90 917 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 PRTGQ2VWP7 1150 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 LINC00303Q3SY05 128 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 CATSPEREQ5SY80 951 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 MLIPQ5VWP3 458 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 TRMT10CQ7L0Y3 403 aaKnown RBP12.11□□□□□ -0.47
LSM5-201ENST00000223084 TBC1D1Q86TI0 1168 aaPredicted RBP12.11□□□□□ -0.47
LSM5-201ENST00000223084 ISCA2Q86U28 154 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 THOC6Q86W42 341 aaKnown RBP12.11□□□□□ -0.47
LSM5-201ENST00000223084 TMEM151BQ8IW70 566 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 CENPLQ8N0S6 344 aaPredicted RBP12.11□□□□□ -0.47
LSM5-201ENST00000223084 CSNK1A1LQ8N752 337 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 PROKR1Q8TCW9 393 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 EXTL1Q92935 676 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 ESAMQ96AP7 390 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 MACROD1Q9BQ69 325 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 HAUS8Q9BT25 410 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 GPR87Q9BY21 358 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 EPB41L4BQ9H329 900 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 ANKZF1Q9H8Y5 726 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 SLC22A11Q9NSA0 550 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 RNF112Q9ULX5 631 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 SLC22A14Q9Y267 594 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 ACOT9Q9Y305 439 aa12.11□□□□□ -0.47
LSM5-201ENST00000223084 IKBKGQ9Y6K9 419 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms