RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 ACSL6Q9UKU0 697 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 NEU3Q9UQ49 428 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 ANGPT4Q9Y264 503 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 GPSM3Q9Y4H4 160 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 SLC28A2O43868 658 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 CCNDBP1O95273 360 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 SLC35G4P0C7Q5 338 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 LAMP1P11279 417 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 BUD31P41223 144 aaPredicted RBP13.17□□□□□ -0.3
RAB3D-201ENST00000222120 PTCHD4Q6ZW05 846 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 FAM124AQ86V42 546 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 CARM1Q86X55 608 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 HOMEZQ8IX15 550 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 GTF2H4Q92759 462 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 PKP4Q99569 1192 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 COPS4Q9BT78 406 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 THUMPD1Q9NXG2 353 aaKnown RBP13.17□□□□□ -0.3
RAB3D-201ENST00000222120 ZNF99A8MXY4 864 aaPredicted RBP13.17□□□□□ -0.3
RAB3D-201ENST00000222120 POP7O75817 140 aaKnown RBP13.17□□□□□ -0.3
RAB3D-201ENST00000222120 SLC16A8O95907 504 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 HLA-FP30511 346 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 MAT2AP31153 395 aaKnown RBP13.17□□□□□ -0.3
RAB3D-201ENST00000222120 SSR2P43308 183 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 TAS2R50P59544 299 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 CDC42P60953 191 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 CD47Q08722 323 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 RAB33AQ14088 237 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 TRIM71Q2Q1W2 868 aaKnown RBP13.17□□□□□ -0.3
RAB3D-201ENST00000222120 COQ5Q5HYK3 327 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 NHSL2Q5HYW2 709 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 GCNT6Q5T4J0 391 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 TBPL2Q6SJ96 375 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 HMGN2P46Q86SG4 172 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 TBC1D19Q8N5T2 526 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 POC5Q8NA72 575 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 TCEAL4Q96EI5 215 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 CMTM7Q96FZ5 175 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 IL4I1Q96RQ9 567 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 SLC35A5Q9BS91 424 aa13.17□□□□□ -0.3
RAB3D-201ENST00000222120 TRIM43BA6NCK2 446 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 E7EQ34 232 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 DDX5P17844 614 aaKnown RBP13.16□□□□□ -0.3
RAB3D-201ENST00000222120 MAPK12P53778 367 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 VBP1P61758 197 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 GRM2Q14416 872 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 BRAT1Q6PJG6 821 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 C12orf76Q8N812 135 aaPredicted RBP13.16□□□□□ -0.3
RAB3D-201ENST00000222120 OTUB1Q96FW1 271 aaPredicted RBP13.16□□□□□ -0.3
RAB3D-201ENST00000222120 YIPF4Q9BSR8 244 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 SLC46A2Q9BY10 475 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 KCNH6Q9H252 994 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 H2AFY2Q9P0M6 372 aaPredicted RBP13.16□□□□□ -0.3
RAB3D-201ENST00000222120 PITPNM1O00562 1244 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 ABCB7O75027 752 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 C6orf47O95873 294 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 JAK1P23458 1154 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 VIPR1P32241 457 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 SLC14A2Q15849 920 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 TBC1D25Q3MII6 688 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 ANKRD34AQ69YU3 496 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 ZNF783Q6ZMS7 281 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 PPP1R16AQ96I34 528 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 TTLL2Q9BWV7 592 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 TEX12Q9BXU0 123 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 ZNF385DQ9H6B1 395 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 IL36AQ9UHA7 158 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 PCDHGA8Q9Y5G5 932 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 H0YJX3 145 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 BMP10O95393 424 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 CDK4P11802 303 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 KDELR2P33947 212 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 SOX6P35712 828 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 CLDN8P56748 225 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 GAREM2Q75VX8 874 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 GET4Q7L5D6 327 aaPredicted RBP13.16□□□□□ -0.3
RAB3D-201ENST00000222120 MTIF3Q9H2K0 278 aaKnown RBP13.16□□□□□ -0.3
RAB3D-201ENST00000222120 ERVK-18Q9QC07 812 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 PSME2Q9UL46 239 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 CCL26Q9Y258 94 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 A0A1W2PRB8 838 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 OR1F1O43749 312 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 EIF2S1P05198 315 aaKnown RBP13.16□□□□□ -0.3
RAB3D-201ENST00000222120 CREMQ03060 361 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 ACVR1Q04771 509 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 SKIV2LQ15477 1246 aaKnown RBP13.16□□□□□ -0.3
RAB3D-201ENST00000222120 INAQ16352 499 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 GPAT3Q53EU6 434 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 DSG4Q86SJ6 1040 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 ZNF557Q8N988 423 aaPredicted RBP13.16□□□□□ -0.3
RAB3D-201ENST00000222120 ZNF583Q96ND8 569 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 GPATCH1Q9BRR8 931 aaKnown RBP13.16□□□□□ -0.3
RAB3D-201ENST00000222120 C11orf16Q9NQ32 467 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 KLHL20Q9Y2M5 609 aa13.16□□□□□ -0.3
RAB3D-201ENST00000222120 CLTBP09497 229 aa13.15□□□□□ -0.3
RAB3D-201ENST00000222120 CBSLP0DN79 551 aa13.15□□□□□ -0.3
RAB3D-201ENST00000222120 CD36P16671 472 aa13.15□□□□□ -0.3
RAB3D-201ENST00000222120 SDC1P18827 310 aa13.15□□□□□ -0.3
RAB3D-201ENST00000222120 CR2P20023 1033 aa13.15□□□□□ -0.3
RAB3D-201ENST00000222120 PPIBP23284 216 aaKnown RBP13.15□□□□□ -0.3
RAB3D-201ENST00000222120 HOXC8P31273 242 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms