RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 CADM3Q8N126 398 aa16.74■□□□□ 0.27
USB1-201ENST00000219281 CBARPQ8N350 705 aaPredicted RBP16.74■□□□□ 0.27
USB1-201ENST00000219281 PHF10Q8WUB8 498 aaKnown RBP16.74■□□□□ 0.27
USB1-201ENST00000219281 LGALS12Q96DT0 336 aa16.74■□□□□ 0.27
USB1-201ENST00000219281 SIRT5Q9NXA8 310 aa16.74■□□□□ 0.27
USB1-201ENST00000219281 ZDHHC3Q9NYG2 299 aa16.74■□□□□ 0.27
USB1-201ENST00000219281 MBD1Q9UIS9 605 aaPredicted RBP16.74■□□□□ 0.27
USB1-201ENST00000219281 EPN2O95208 641 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 HIST1H2AGP0C0S8 130 aaPredicted RBP16.73■□□□□ 0.27
USB1-201ENST00000219281 HIST1H2ADP20671 130 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 TGM1P22735 817 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 AOAHP28039 575 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 RPP38P78345 283 aaKnown RBP16.73■□□□□ 0.27
USB1-201ENST00000219281 MTAPQ13126 283 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 UGT8Q16880 541 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 ATP13A5Q4VNC0 1218 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 CDKL4Q5MAI5 379 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 CRTC1Q6UUV9 634 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 RFLNAQ6ZTI6 216 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 AHSA2Q719I0 299 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 PAGE2Q7Z2X7 111 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 CYP2U1Q7Z449 544 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 SYT12Q8IV01 421 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 HOMEZQ8IX15 550 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 L3MBTL4Q8NA19 623 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 CDC26Q8NHZ8 85 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 TPD52L3Q96J77 140 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 HIST1H2AHQ96KK5 128 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 COPS8Q99627 209 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 HIST1H2AJQ99878 128 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 H2AFJQ9BTM1 129 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 C2orf49Q9BVC5 232 aaPredicted RBP16.73■□□□□ 0.27
USB1-201ENST00000219281 SLC12A9Q9BXP2 914 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 THUMPD1Q9NXG2 353 aaKnown RBP16.73■□□□□ 0.27
USB1-201ENST00000219281 VPS4AQ9UN37 437 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 ERVK-11Q9UQG0 969 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 MICAL3Q7RTP6 2002 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 MAGEB17A8MXT2 336 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 CD36P16671 472 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 EFNA1P20827 205 aaPredicted RBP16.73■□□□□ 0.27
USB1-201ENST00000219281 GRK3P35626 688 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 CREMQ03060 361 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 MVKQ03426 396 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 BOP1Q14137 746 aaKnown RBP16.73■□□□□ 0.27
USB1-201ENST00000219281 FRG2Q64ET8 278 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 MSANTD1Q6ZTZ1 278 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 CBLL1Q75N03 491 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 EIF3MQ7L2H7 374 aaKnown RBP16.73■□□□□ 0.27
USB1-201ENST00000219281 PRSS48Q7RTY5 328 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 VRK3Q8IV63 474 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 CLECL1Q8IZS7 167 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 PGBD3Q8N328 593 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 MINDY2Q8NBR6 621 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 FRG2BQ96QU4 278 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 REEP1Q9H902 201 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 CCNB1IP1Q9NPC3 277 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 GIN1Q9NXP7 522 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 PCDH10Q9P2E7 1040 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 COL4A6Q14031 1691 aa16.73■□□□□ 0.27
USB1-201ENST00000219281 LAMA3Q16787 3333 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 TRIM43BA6NCK2 446 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 AGAP14A8MT82 685 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 TTC34A8MYJ7 566 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 WBP4O75554 376 aaKnown RBP16.72■□□□□ 0.27
USB1-201ENST00000219281 SOD2P04179 222 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 GPX2P18283 190 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 PRPS1L1P21108 318 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 SLC6A12P48065 614 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 WNT3P56703 355 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 ZXDBP98169 803 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 NPRL3Q12980 569 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 SF1Q15637 639 aaKnown RBP16.72■□□□□ 0.27
USB1-201ENST00000219281 INAVAQ3KP66 663 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 LRRC66Q68CR7 880 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 TTC23LQ6PF05 361 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 PLD3Q8IV08 490 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 ASIC4Q96FT7 647 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 C19orf43Q9BQ61 176 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 SLIRPQ9GZT3 109 aaKnown RBP16.72■□□□□ 0.27
USB1-201ENST00000219281 ATG10Q9H0Y0 220 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 POLE4Q9NR33 117 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 OR2A25A4D2G3 310 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 PCDHGA12O60330 932 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 SCN2BO60939 215 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 SOCS5O75159 536 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 ZNF821O75541 412 aaPredicted RBP16.72■□□□□ 0.27
USB1-201ENST00000219281 ALOX5P09917 674 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 COX7A2P14406 83 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 TGFBR2P37173 567 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 CHIT1Q13231 466 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 MAPK11Q15759 364 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 CATSPEREQ5SY80 951 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 ERICH5Q6P6B1 374 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 TCAIMQ8N3R3 496 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 CSGALNACT1Q8TDX6 532 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 ADAMTS19Q8TE59 1207 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 APH1BQ8WW43 257 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 P2RY13Q9BPV8 354 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 HERC2P3Q9BVR0 1158 aa16.72■□□□□ 0.27
USB1-201ENST00000219281 BBS2Q9BXC9 721 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms