RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 RGPD4Q7Z3J3 1758 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 WRBO00258 174 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 WNT9AO14904 365 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 AXIN1O15169 862 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 AOC2O75106 756 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 ENDOD1O94919 500 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 AK1P00568 194 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 DNTTP04053 509 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 MAGEA6P43360 314 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 GSK3BP49841 420 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 SEPHS1P49903 392 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 ZNF280AP59817 542 aaPredicted RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 ZNF155Q12901 538 aaPredicted RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 TAF10Q12962 218 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 KEAP1Q14145 624 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 RHEBQ15382 184 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 MANEALQ5VSG8 457 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 PNCKQ6P2M8 343 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 OR10H4Q8NGA5 316 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 FATE1Q969F0 183 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 VMP1Q96GC9 406 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 EXOC2Q96KP1 924 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 VRK1Q99986 396 aaPredicted RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 CNPPD1Q9BV87 410 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 UCK2Q9BZX2 261 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 PITHD1Q9GZP4 211 aaPredicted RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 BRF2Q9HAW0 419 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 SOHLH2Q9NX45 425 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 TESMINQ9Y4I5 508 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 DISC1C4P0D8 188 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 KCNJ13O60928 360 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 PRLP01236 227 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 ANXA3P12429 323 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 IL7RP16871 459 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 AMD1P17707 334 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 IL12BP29460 328 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 CAMK1Q14012 370 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 CRB2Q5IJ48 1285 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 FIBCD1Q8N539 461 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 TFAP2BQ92481 460 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 CD180Q99467 661 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 HEPHQ9BQS7 1158 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 MCMBPQ9BTE3 642 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 CD244Q9BZW8 370 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 BHLHE41Q9C0J9 482 aaPredicted RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 GPN2Q9H9Y4 310 aaPredicted RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 BPIFA1Q9NP55 256 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 MRPS30Q9NP92 439 aaKnown RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 COL20A1Q9P218 1284 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 NKX1-2Q9UD57 310 aaPredicted RBP4.3□□□□□ -1.72
CHD9-201ENST00000219084 FBXO10Q9UK96 956 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 PACSIN3Q9UKS6 424 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 FZD4Q9ULV1 537 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 ALG5Q9Y673 324 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 PDE4DIPQ5VU43 2346 aa4.3□□□□□ -1.72
CHD9-201ENST00000219084 PRSS51A0A1B0GVH4 220 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 C2orf71A6NGG8 1288 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 DCLK1O15075 740 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 MID1O15344 667 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 TBX1O43435 398 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 HLA-DQB2P05538 268 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 LINGO3P0C6S8 592 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 GKN3PP0CG01 181 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 HSPA7P48741 367 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 NDUFV1P49821 464 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 GDF10P55107 478 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 CTBP2P56545 445 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 TAS2R39P59534 338 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 ZNF763Q0D2J5 394 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 LSAMPQ13449 338 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 PROX2Q3B8N5 592 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 C9orf131Q5VYM1 1079 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 DCDC5Q6ZRR9 648 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 CLEC20AQ6ZU45 233 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 NCCRP1Q6ZVX7 275 aaPredicted RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 LGI4Q8N135 537 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 PARP8Q8N3A8 854 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 ADAMTS18Q8TE60 1221 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 SLC35F5Q8WV83 523 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 DDX1Q92499 740 aaKnown RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 SPACA7Q96KW9 195 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 ZSWIM3Q96MP5 696 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 ACTL8Q9H568 366 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.29□□□□□ -1.72
CHD9-201ENST00000219084 KLHL21Q9UJP4 597 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 PLCL2Q9UPR0 1127 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 GPSM3Q9Y4H4 160 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 LRRC72A6NJI9 287 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 OR2AT4A6NND4 320 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 ZNF670-ZNF695F2Z2N8 137 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 M0R233 179 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 CLDN5O00501 218 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 HCN1O60741 890 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 MT-ND2P03891 347 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 IL7P13232 177 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 PRKAG1P54619 331 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 CXCR4P61073 352 aa4.29□□□□□ -1.72
CHD9-201ENST00000219084 SIM2Q14190 667 aaPredicted RBP4.29□□□□□ -1.72
CHD9-201ENST00000219084 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.29□□□□□ -1.724e-6■■■□□ 19.2
CHD9-201ENST00000219084 SIRPB2Q5JXA9 342 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms