RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 EPCAMP16422 314 aa12.73□□□□□ -0.37
CTNS-201ENST00000046640 CD22P20273 847 aa12.73□□□□□ -0.37
CTNS-201ENST00000046640 PDHA2P29803 388 aa12.73□□□□□ -0.37
CTNS-201ENST00000046640 IRS1P35568 1242 aa12.73□□□□□ -0.37
CTNS-201ENST00000046640 POLR2LP62875 67 aaKnown RBP12.73□□□□□ -0.37
CTNS-201ENST00000046640 RUNDC3AQ59EK9 446 aa12.73□□□□□ -0.37
CTNS-201ENST00000046640 TCEAL5Q5H9L2 206 aa12.73□□□□□ -0.37
CTNS-201ENST00000046640 NECAB2Q7Z6G3 386 aa12.73□□□□□ -0.37
CTNS-201ENST00000046640 UBTD2Q8WUN7 234 aa12.73□□□□□ -0.37
CTNS-201ENST00000046640 TRUB1Q8WWH5 349 aaKnown RBP12.73□□□□□ -0.37
CTNS-201ENST00000046640 ZFYVE19Q96K21 471 aa12.73□□□□□ -0.37
CTNS-201ENST00000046640 HEPHQ9BQS7 1158 aa12.73□□□□□ -0.37
CTNS-201ENST00000046640 ALOXE3Q9BYJ1 711 aa12.73□□□□□ -0.37
CTNS-201ENST00000046640 EPS8L2Q9H6S3 715 aa12.73□□□□□ -0.37
CTNS-201ENST00000046640 TMEM9Q9P0T7 183 aa12.73□□□□□ -0.37
CTNS-201ENST00000046640 ERVK-18Q9QC07 812 aa12.73□□□□□ -0.37
CTNS-201ENST00000046640 E7EQ34 232 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 TULP3O75386 442 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 GSTM2P28161 218 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 GP2P55259 537 aaKnown RBP12.72□□□□□ -0.37
CTNS-201ENST00000046640 GSTM4Q03013 218 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 RAPSNQ13702 412 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 ACOX1Q15067 660 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 SYTL3Q4VX76 610 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.72□□□□□ -0.37
CTNS-201ENST00000046640 FRG2Q64ET8 278 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 LAIR2Q6ISS4 152 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 METTL3Q86U44 580 aaKnown RBP12.72□□□□□ -0.37
CTNS-201ENST00000046640 GPR156Q8NFN8 814 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 CHPT1Q8WUD6 406 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 SH3YL1Q96HL8 342 aaPredicted RBP12.72□□□□□ -0.37
CTNS-201ENST00000046640 ZNF641Q96N77 438 aaPredicted RBP12.72□□□□□ -0.37
CTNS-201ENST00000046640 FRG2BQ96QU4 278 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 DPH2Q9BQC3 489 aaPredicted RBP12.72□□□□□ -0.37
CTNS-201ENST00000046640 OSBPL10Q9BXB5 764 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 YTHDF1Q9BYJ9 559 aaKnown RBP12.72□□□□□ -0.37
CTNS-201ENST00000046640 CPEB1Q9BZB8 566 aaKnown RBP12.72□□□□□ -0.37
CTNS-201ENST00000046640 KAT8Q9H7Z6 458 aaKnown RBP12.72□□□□□ -0.37
CTNS-201ENST00000046640 SERHLQ9NQF3 203 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 DNAJC11Q9NVH1 559 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 DNAJB9Q9UBS3 223 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 SCN8AQ9UQD0 1980 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 KRBA1A5PL33 1030 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 ARHGEF33A8MVX0 844 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 SLC1A7O00341 560 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 RFXANKO14593 260 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 SGTAO43765 313 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 NDUFS2O75306 463 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 PRSS23O95084 383 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 GBAP04062 536 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 LINC00271P0C7V0 271 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 CBSLP0DN79 551 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 HLA-EP13747 358 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 TIMP2P16035 220 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 CYP2A7P20853 494 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 PSMB9P28065 219 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 CBSP35520 551 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 PFN3P60673 137 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 PON2Q15165 354 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 SMN1Q16637 294 aaKnown RBP12.72□□□□□ -0.37
CTNS-201ENST00000046640 SLC16A12Q6ZSM3 486 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 ZNF621Q6ZSS3 439 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 ZNF551Q7Z340 670 aaPredicted RBP12.72□□□□□ -0.37
CTNS-201ENST00000046640 CACUL1Q86Y37 369 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 LEMD2Q8NC56 503 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 UBE2FQ969M7 185 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 C8orf4Q9NR00 106 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 RASSF1Q9NS23 344 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 REV3LO60673 3130 aa12.72□□□□□ -0.37
CTNS-201ENST00000046640 M0R3G1 203 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 CREG1O75629 220 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 NADKO95544 446 aaPredicted RBP12.71□□□□□ -0.37
CTNS-201ENST00000046640 C8GP07360 202 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 MAGP20916 626 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 SPATS1Q496A3 300 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 RBM48Q5RL73 367 aaKnown RBP12.71□□□□□ -0.37
CTNS-201ENST00000046640 CES5AQ6NT32 575 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 SYT12Q8IV01 421 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 RAVER1Q8IY67 606 aaKnown RBP12.71□□□□□ -0.37
CTNS-201ENST00000046640 MICU2Q8IYU8 434 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 CLECL1Q8IZS7 167 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 C2orf73Q8N5S3 287 aaPredicted RBP12.71□□□□□ -0.37
CTNS-201ENST00000046640 RASGEF1AQ8N9B8 481 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 LRRC3BQ96PB8 259 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 EMILIN2Q9BXX0 1053 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 ERVK-11Q9UQG0 969 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 IGLV3-16A0A075B6K0 115 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 KCNE1BA0A087WTH5 132 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 NUAK1O60285 661 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 FADS2O95864 444 aaKnown RBP12.71□□□□□ -0.37
CTNS-201ENST00000046640 SYN1P17600 705 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 CTNNB1P35222 781 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 HPCAL1P37235 193 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 CLDN8P56748 225 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 EMX1Q04741 257 aaPredicted RBP12.71□□□□□ -0.37
CTNS-201ENST00000046640 NOXRED1Q6NXP6 359 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 EID3Q8N140 333 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 GLB1L3Q8NCI6 653 aaPredicted RBP12.71□□□□□ -0.37
CTNS-201ENST00000046640 POF1BQ8WVV4 589 aa12.71□□□□□ -0.37
CTNS-201ENST00000046640 ASZ1Q8WWH4 475 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms