RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 TecP24604 630 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 PkmP52480 531 aaKnown RBP9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Sesn2P58043 480 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Rab10P61027 200 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Barhl1P63157 327 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Tff2Q03404 129 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Pecam1Q08481 727 aaKnown RBP9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 LipnQ3U4B4 400 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Slc22a16Q497L8 649 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Sdr16c5Q7TQA3 309 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gpr119Q7TQP3 335 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Spata7Q80VP2 582 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Chst2Q80WV3 530 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 C2cd4bQ80XU5 340 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Tmem179Q8BHH9 233 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Hs3st5Q8BSL4 346 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Mpp7Q8BVD5 576 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gpr22Q8BZL4 432 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Q8CC96 669 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ipo13Q8K0C1 963 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 WrbQ8K0D7 174 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Sec14l4Q8R0F9 403 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 RbksQ8R1Q9 323 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Vmn1r230Q8R2A2 316 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Pcdha9Q91Y11 979 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Rilpl2Q99LE1 197 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ca15Q99N23 324 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Slc22a5Q9Z0E8 557 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Vmn2r74E9PW21 853 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Olfr596F8VQ26 312 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Zfp616J3QN14 987 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Has3O08650 554 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 AoahO35298 574 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Csf2P01587 141 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 LplP11152 474 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Crybb2P62696 205 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gsdmc2Q2KHK6 480 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Pi4k2aQ2TBE6 479 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Rars2Q3U186 578 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ccdc61Q3UJV1 511 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Dyrk2Q5U4C9 599 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Map4k2Q61161 821 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 ArhgdibQ61599 200 aaKnown RBP9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Igsf5Q7TSN7 370 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 KhnynQ80U38 671 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Trmt61aQ80XC2 290 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Pan2Q8BGF7 1200 aaKnown RBP9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Grik4Q8BMF5 956 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Q8BP99 230 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 EtnpplQ8BWU8 499 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Nlgn3Q8BYM5 825 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 TwnkQ8CIW5 685 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 PolbQ8K409 335 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Olfr691Q8VGW5 322 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 AclyQ91V92 1091 aaKnown RBP9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Slc44a4Q91VA1 707 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Pcdhac1Q91Y10 964 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Fyttd1Q91Z49 317 aaKnown RBP9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Med6Q921D4 246 aaKnown RBP9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 HypmQ9CR04 117 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 MmabQ9D273 237 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Taf1dQ9D4V4 322 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ngly1Q9JI78 651 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Arih2Q9Z1K6 492 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Klrc1Q9Z202 244 aa9.48□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Megf6Q80V70 1572 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gm4779A0A1B0GR91 561 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Eif2b3B1AUN2 452 aaKnown RBP9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Otud4B2RRE7 1107 aaKnown RBP9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Olfr544E9PX47 334 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gm10608E9PZ13 166 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Zfp605E9QAH2 694 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Mdm4O35618 489 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Mtnd2P03893 345 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Muc13P19467 573 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Cyp2c37P56654 490 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Tbx3P70324 741 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ctps1P70698 591 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 PdgfcQ8CI19 345 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Crlf2Q8CII9 359 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gsto2Q8K2Q2 248 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Appl1Q8K3H0 707 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Dcaf8Q8N7N5 591 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Rhobtb2Q91V93 728 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Pcdha6Q91Y14 946 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Pcdha1Q91Y21 948 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Coro6Q920M5 471 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Acy1Q99JW2 408 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gdpd1Q9CRY7 314 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Ift27Q9D0P8 186 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Efhc2Q9D485 750 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Agpat3Q9D517 376 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Dll4Q9JI71 686 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Il22Q9JJY9 179 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Rgs17Q9QZB0 210 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Med20Q9R0X0 212 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Gja10Q9WUS4 505 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Msl3Q9WVG9 525 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Tsc2Q61037 1814 aa9.47□□□□□ -0.89
Hmgb1-201ENSMUST00000085546 Scn9aQ62205 1984 aa9.47□□□□□ -0.89
Retrieved 100 of 22,080 RNA–protein pairs in 88 ms