RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 DckP43346 260 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Gm7030Q0WXH6 285 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Parp8Q3UD82 852 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Q8BGK9 164 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Csgalnact1Q8BJQ9 530 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Klf8Q8BLM0 355 aaKnown RBP12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Gpr20Q8BYC4 358 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Glis1Q8K1M4 789 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Vmn1r203Q8R273 311 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Mrpl15Q9CPR5 295 aaKnown RBP12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Timp4Q9JHB3 224 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 St6galnac4Q9R2B6 360 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Gm21865A0A087WRL2 222 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Olfr74A2BHP6 318 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Btbd35f28A2CFD5 498 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Prdm14E9Q3T6 561 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Gm21800J3QMJ9 180 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Btbd35f30J3QML3 498 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Rem1O35929 297 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 AurkcO88445 282 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Serpine1P22777 402 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Pcbp1P60335 356 aaKnown RBP12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Kcnj8P97794 424 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Nr2f1Q60632 422 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Tead4Q62296 427 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Pkp4Q68FH0 1190 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Crispld1Q8CGD2 500 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Hmgcll1Q8JZS7 343 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 NrmQ8VC65 262 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Pex16Q91XC9 336 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Ranbp3Q9CT10 491 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 VasnQ9CZT5 673 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Plpp6Q9D4F2 292 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Tbc1d20Q9D9I4 402 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Fut2Q9JL27 347 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 PfkpQ9WUA3 784 aaKnown RBP12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 AccsA2AIG8 502 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Gm10338K7N692 204 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 RfngO09009 332 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Rc3h2P0C090 1187 aaKnown RBP12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Mup4P11590 178 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Pabpc1P29341 636 aaKnown RBP12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Lrpap1P55302 360 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Mkl2P59759 1080 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Gsk3aQ2NL51 490 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Rars2Q3U186 578 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Zfp868Q3UTQ6 422 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Scn2bQ56A07 215 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Arcn1Q5XJY5 511 aaKnown RBP12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Adam2Q60718 735 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 RbfaQ6P3B9 350 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Dpy19l3Q71B07 716 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Zfp324Q78F42 583 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Ugt2b35Q8BJL9 529 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Kyat1Q8BTY1 424 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Zbtb20Q8K0L9 741 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Tsen15Q8R3W5 168 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Zmynd11Q8R5C8 602 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Capn8Q91VA3 703 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 GlyatQ91XE0 296 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Pcdhga9Q91XX9 932 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Pcdhb19Q91Y01 801 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Sntg1Q925E1 517 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Cyp4v2Q9DBW0 525 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Ern1Q9EQY0 977 aa12.42□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Zfp969A2ART2 485 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Tmem245B1AZA5 876 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Vmn2r54K7N649 806 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Nfkbil1O88995 381 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Ntf3P20181 258 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 FynP39688 537 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Slc1a5P51912 553 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Emx1Q04742 257 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Klra2Q60660 288 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Bnc2Q8BMQ3 1127 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Klhl12Q8BZM0 568 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 EedQ921E6 441 aaKnown RBP12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 DdoQ922Z0 341 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 BniplQ99JU7 328 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Ift46Q9DB07 301 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Uba7Q9DBK7 977 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Acss2Q9QXG4 701 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 CcniQ9Z2V9 377 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Nup205A0A0J9YUD5 2061 aaKnown RBP12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Wfdc16A2A5H4 111 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Daw1D3Z7A5 415 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Cpa3P15089 417 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Dlx2P40764 332 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Epb42P49222 691 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Nploc4P60670 608 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 FhP97807 507 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Arnt2Q61324 712 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Zpbp2Q6X786 326 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Ccdc126Q8BIS8 140 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Znf410Q8BKX7 478 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Fam180aQ8BR21 173 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Gpr22Q8BZL4 432 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Olfr791Q8VGJ0 312 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Rsph9Q9D9V4 276 aa12.41□□□□□ -0.42
Clcn3-201ENSMUST00000004430 Wdr53Q9DB94 358 aa12.41□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 32.4 ms