RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 KCNE2Q9Y6J6 123 aa12.67□□□□□ -0.38
PHGDH-221ENST00000641573 SPTY2D1-AS1A0A0U1RR47 76 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 OR52A4PA6NMU1 304 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 ZNF839A8K0R7 811 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 MEI4A8MW99 385 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 SLC28A1O00337 649 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 CDX4O14627 284 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-221ENST00000641573 MAP3K13O43283 966 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 UGDHO60701 494 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 PEX11AO75192 247 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 WFS1O76024 890 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 ZIC2O95409 532 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-221ENST00000641573 ALDOCP09972 364 aaKnown RBP12.66□□□□□ -0.38
PHGDH-221ENST00000641573 ERGP11308 486 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 MTHFD1P11586 935 aaKnown RBP12.66□□□□□ -0.38
PHGDH-221ENST00000641573 NPPBP16860 134 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 BCKDHBP21953 392 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 CCND1P24385 295 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 CPA2P48052 419 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 RASSF2P50749 326 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 ATP4BP51164 291 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 SIM1P81133 766 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-221ENST00000641573 DOC2AQ14183 400 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 ZRSR2Q15696 482 aaKnown RBP12.66□□□□□ -0.38
PHGDH-221ENST00000641573 CYP2A13Q16696 494 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 PRAMEF14Q5SWL7 426 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 PRAMEF13Q5VWM6 474 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 OGFOD2Q6N063 350 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 SLC30A9Q6PML9 568 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 SUSD1Q6UWL2 747 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 ABRAXAS1Q6UWZ7 409 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 Q6ZSR9 355 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 SPATA19Q7Z5L4 167 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 NRROSQ86YC3 692 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 DCP2Q8IU60 420 aaKnown RBP12.66□□□□□ -0.38
PHGDH-221ENST00000641573 RGL4Q8IZJ4 473 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 SFRP1Q8N474 314 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 RAB42Q8N4Z0 105 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 C2orf73Q8N5S3 287 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-221ENST00000641573 POU5F2Q8N7G0 328 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 SETD7Q8WTS6 366 aaKnown RBP12.66□□□□□ -0.38
PHGDH-221ENST00000641573 USP7Q93009 1102 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 KLHL29Q96CT2 875 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 SLC7A6OSQ96CW6 309 aaPredicted RBP12.66□□□□□ -0.38
PHGDH-221ENST00000641573 HBEGFQ99075 208 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 MIPEPQ99797 713 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 MENTQ9BUN1 341 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 LRMDAQ9H2I8 198 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 ELOVL6Q9H5J4 265 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 FARSBQ9NSD9 589 aaKnown RBP12.66□□□□□ -0.38
PHGDH-221ENST00000641573 MRGBPQ9NV56 204 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 PCOLCE2Q9UKZ9 415 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 SNX6Q9UNH7 406 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 HEBP2Q9Y5Z4 205 aa12.66□□□□□ -0.38
PHGDH-221ENST00000641573 A0A1W2PR77 199 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 PATE3B3GLJ2 98 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 RGS14O43566 566 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 EML2O95834 649 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 PDYNP01213 254 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 WNT1P04628 370 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 COX4I1P13073 169 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 GNAZP19086 355 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 CD22P20273 847 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 VARSP26640 1264 aaKnown RBP12.65□□□□□ -0.38
PHGDH-221ENST00000641573 MAOBP27338 520 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 CD38P28907 300 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 PTPN4P29074 926 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 HNF4AP41235 474 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 CASP2P42575 452 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 STX1BP61266 288 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 ILF3Q12906 894 aaKnown RBP eCLIP12.65□□□□□ -0.38
PHGDH-221ENST00000641573 HERC3Q15034 1050 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 NR6A1Q15406 480 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 ATP6AP1LQ52LC2 224 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 C6orf136Q5SQH8 315 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 THEMIS2Q5TEJ8 643 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 PMS2CLQ68D20 193 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 GRHL2Q6ISB3 625 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 LCTLQ6UWM7 567 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 SLCO4C1Q6ZQN7 724 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 RINLQ6ZS11 566 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 ASRGL1Q7L266 308 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 TRIM46Q7Z4K8 759 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 KIF2BQ8N4N8 673 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 MFSD2AQ8NA29 543 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 GPBAR1Q8TDU6 330 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 SLC5A11Q8WWX8 675 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 SELENOMQ8WWX9 145 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 SMPDL3AQ92484 453 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 NEIL2Q969S2 332 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 MTFMTQ96DP5 389 aaKnown RBP12.65□□□□□ -0.38
PHGDH-221ENST00000641573 CMTM5Q96DZ9 223 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 HSPA12BQ96MM6 686 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 NRTNQ99748 197 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 GSDMCQ9BYG8 508 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 MIR1-1HGQ9H1L0 117 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 TCEAL2Q9H3H9 227 aaPredicted RBP12.65□□□□□ -0.38
PHGDH-221ENST00000641573 CAAP1Q9H8G2 361 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 SH2B3Q9UQQ2 575 aa12.65□□□□□ -0.38
PHGDH-221ENST00000641573 CCL27Q9Y4X3 112 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms