RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 LHX6Q9UPM6 363 aa25.58■■□□□ 1.69
VEGFA-231ENST00000640499 PCDHGA4Q9Y5G9 962 aa25.58■■□□□ 1.69
VEGFA-231ENST00000640499 A0A087WUV0 522 aaPredicted RBP25.57■■□□□ 1.68
VEGFA-231ENST00000640499 A0A0J9YVX5 310 aa25.57■■□□□ 1.68
VEGFA-231ENST00000640499 MEN1O00255 615 aa25.57■■□□□ 1.68
VEGFA-231ENST00000640499 MT-ND3P03897 115 aa25.57■■□□□ 1.68
VEGFA-231ENST00000640499 ALDOAP04075 364 aaKnown RBP25.57■■□□□ 1.68
VEGFA-231ENST00000640499 ABHD2P08910 425 aa25.57■■□□□ 1.68
VEGFA-231ENST00000640499 TNFRSF8P28908 595 aa25.57■■□□□ 1.68
VEGFA-231ENST00000640499 CDKL1Q00532 357 aa25.57■■□□□ 1.68
VEGFA-231ENST00000640499 C18orf21Q32NC0 220 aaPredicted RBP25.57■■□□□ 1.68
VEGFA-231ENST00000640499 ZC3H12BQ5HYM0 836 aaKnown RBP25.57■■□□□ 1.68
VEGFA-231ENST00000640499 PRAMEF13Q5VWM6 474 aa25.57■■□□□ 1.68
VEGFA-231ENST00000640499 PAFAH2Q99487 392 aa25.57■■□□□ 1.68
VEGFA-231ENST00000640499 DHRS4Q9BTZ2 278 aa25.57■■□□□ 1.68
VEGFA-231ENST00000640499 ANKMY1Q9P2S6 941 aa25.57■■□□□ 1.68
VEGFA-231ENST00000640499 MRPS18BQ9Y676 258 aaKnown RBP25.57■■□□□ 1.68
VEGFA-231ENST00000640499 CHD6Q8TD26 2715 aa25.57■■□□□ 1.68
VEGFA-231ENST00000640499 MDC1Q14676 2089 aaKnown RBP25.56■■□□□ 1.68
VEGFA-231ENST00000640499 H7BY64 318 aa25.56■■□□□ 1.68
VEGFA-231ENST00000640499 ZSCAN9O15535 394 aaPredicted RBP25.56■■□□□ 1.68
VEGFA-231ENST00000640499 MED26O95402 600 aa25.56■■□□□ 1.68
VEGFA-231ENST00000640499 C2P06681 752 aa25.56■■□□□ 1.68
VEGFA-231ENST00000640499 CAPN1P07384 714 aa25.56■■□□□ 1.68
VEGFA-231ENST00000640499 CCNYL3P0C7X3 344 aa25.56■■□□□ 1.68
VEGFA-231ENST00000640499 CRABP2P29373 138 aa25.56■■□□□ 1.68
VEGFA-231ENST00000640499 THEMIS2Q5TEJ8 643 aa25.56■■□□□ 1.68
VEGFA-231ENST00000640499 ISCA2Q86U28 154 aa25.56■■□□□ 1.68
VEGFA-231ENST00000640499 GPR135Q8IZ08 494 aa25.56■■□□□ 1.68
VEGFA-231ENST00000640499 CENPLQ8N0S6 344 aaPredicted RBP25.56■■□□□ 1.68
VEGFA-231ENST00000640499 N4BP2L2Q92802 583 aaPredicted RBP25.56■■□□□ 1.68
VEGFA-231ENST00000640499 ALKBH8Q96BT7 664 aaKnown RBP25.56■■□□□ 1.68
VEGFA-231ENST00000640499 CLIP3Q96DZ5 547 aa25.56■■□□□ 1.68
VEGFA-231ENST00000640499 PRAP1Q96NZ9 151 aa25.56■■□□□ 1.68
VEGFA-231ENST00000640499 GPN2Q9H9Y4 310 aaPredicted RBP25.56■■□□□ 1.68
VEGFA-231ENST00000640499 SNX15Q9NRS6 342 aa25.56■■□□□ 1.68
VEGFA-231ENST00000640499 ZFYVE26Q68DK2 2539 aa25.56■■□□□ 1.68
VEGFA-231ENST00000640499 HAT1O14929 419 aa25.55■■□□□ 1.68
VEGFA-231ENST00000640499 CCNDBP1O95273 360 aa25.55■■□□□ 1.68
VEGFA-231ENST00000640499 DLSTP36957 453 aa25.55■■□□□ 1.68
VEGFA-231ENST00000640499 ATP6V0D1P61421 351 aa25.55■■□□□ 1.68
VEGFA-231ENST00000640499 CYP4F2P78329 520 aa25.55■■□□□ 1.68
VEGFA-231ENST00000640499 IRF9Q00978 393 aa25.55■■□□□ 1.68
VEGFA-231ENST00000640499 PTCHD3Q3KNS1 767 aa25.55■■□□□ 1.68
VEGFA-231ENST00000640499 TLDC1Q6P9B6 456 aa25.55■■□□□ 1.68
VEGFA-231ENST00000640499 LCTLQ6UWM7 567 aa25.55■■□□□ 1.68
VEGFA-231ENST00000640499 RAPH1Q70E73 1250 aa25.55■■□□□ 1.68
VEGFA-231ENST00000640499 ADAMTSL2Q86TH1 951 aa25.55■■□□□ 1.68
VEGFA-231ENST00000640499 KIAA1191Q96A73 305 aa25.55■■□□□ 1.68
VEGFA-231ENST00000640499 RHBDF1Q96CC6 855 aa25.55■■□□□ 1.68
VEGFA-231ENST00000640499 SLC45A3Q96JT2 553 aa25.55■■□□□ 1.68
VEGFA-231ENST00000640499 OR2A5Q96R48 311 aa25.55■■□□□ 1.68
VEGFA-231ENST00000640499 SELENOSQ9BQE4 189 aa25.55■■□□□ 1.68
VEGFA-231ENST00000640499 CHST8Q9H2A9 424 aa25.55■■□□□ 1.68
VEGFA-231ENST00000640499 RALYQ9UKM9 306 aaKnown RBP25.55■■□□□ 1.68
VEGFA-231ENST00000640499 SNX7Q9UNH6 387 aa25.55■■□□□ 1.68
VEGFA-231ENST00000640499 AP1M2Q9Y6Q5 423 aa25.55■■□□□ 1.68
VEGFA-231ENST00000640499 FITM1A5D6W6 292 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 POC1B-GALNT4F8VUJ3 575 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 H0YGG7 62 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 SRPX2O60687 465 aaPredicted RBP25.54■■□□□ 1.68
VEGFA-231ENST00000640499 TCN2P20062 427 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 ITGAXP20702 1163 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 MAGEA12P43365 314 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 VSX2P58304 361 aaPredicted RBP25.54■■□□□ 1.68
VEGFA-231ENST00000640499 ARF3P61204 181 aaPredicted RBP25.54■■□□□ 1.68
VEGFA-231ENST00000640499 CSNK1G2P78368 415 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 RELAQ04206 551 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 TGFBIQ15582 683 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 WASHC2DQ5SRD0 308 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 CAPN13Q6MZZ7 669 aaPredicted RBP25.54■■□□□ 1.68
VEGFA-231ENST00000640499 RHBDD2Q6NTF9 364 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 GPR155Q7Z3F1 870 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 PLD3Q8IV08 490 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 ATL1Q8WXF7 558 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 MR1Q95460 341 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 ISL2Q96A47 359 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 NXNL1Q96CM4 212 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 GPR78Q96P69 363 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 GBP5Q96PP8 586 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 ZFYVE21Q9BQ24 234 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 PCBD2Q9H0N5 130 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 TMEM184CQ9NVA4 438 aa25.54■■□□□ 1.68
VEGFA-231ENST00000640499 DHCR7Q9UBM7 475 aaKnown RBP25.54■■□□□ 1.68
VEGFA-231ENST00000640499 NKX2-8O15522 239 aa25.53■■□□□ 1.68
VEGFA-231ENST00000640499 TAPBPO15533 448 aa25.53■■□□□ 1.68
VEGFA-231ENST00000640499 CCND1P24385 295 aa25.53■■□□□ 1.68
VEGFA-231ENST00000640499 SLC26A3P40879 764 aa25.53■■□□□ 1.68
VEGFA-231ENST00000640499 DNASE1L3Q13609 305 aa25.53■■□□□ 1.68
VEGFA-231ENST00000640499 SLC29A2Q14542 456 aa25.53■■□□□ 1.68
VEGFA-231ENST00000640499 NAA25Q14CX7 972 aa25.53■■□□□ 1.68
VEGFA-231ENST00000640499 DTWD1Q8N5C7 304 aa25.53■■□□□ 1.68
VEGFA-231ENST00000640499 KCTD4Q8WVF5 259 aa25.53■■□□□ 1.68
VEGFA-231ENST00000640499 ZNF180Q9UJW8 692 aa25.53■■□□□ 1.68
VEGFA-231ENST00000640499 ACOT9Q9Y305 439 aa25.53■■□□□ 1.68
VEGFA-231ENST00000640499 PCDHGA6Q9Y5G7 932 aa25.53■■□□□ 1.68
VEGFA-231ENST00000640499 SLU7O95391 586 aaKnown RBP25.52■■□□□ 1.68
VEGFA-231ENST00000640499 INHBAP08476 426 aa25.52■■□□□ 1.68
VEGFA-231ENST00000640499 ANXA5P08758 320 aa25.52■■□□□ 1.68
VEGFA-231ENST00000640499 LTA4HP09960 611 aaKnown RBP25.52■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms