RNA–Protein interactions for RNA: ENST00000637100.1

CLN3-255, Transcript of CLN3, battenin, humanhuman

TSL 5 BASIC

Gene CLN3, Length 1,284 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-255ENST00000637100 RAB42Q8N4Z0 105 aa15.62■□□□□ 0.09
CLN3-255ENST00000637100 ACRBPQ8NEB7 543 aa15.62■□□□□ 0.09
CLN3-255ENST00000637100 MAGEC3Q8TD91 643 aa15.62■□□□□ 0.09
CLN3-255ENST00000637100 OR2A5Q96R48 311 aa15.62■□□□□ 0.09
CLN3-255ENST00000637100 PLCD4Q9BRC7 762 aa15.62■□□□□ 0.09
CLN3-255ENST00000637100 DPH7Q9BTV6 452 aa15.62■□□□□ 0.09
CLN3-255ENST00000637100 RUBCNLQ9H714 662 aa15.62■□□□□ 0.09
CLN3-255ENST00000637100 EIF2B3Q9NR50 452 aaKnown RBP15.62■□□□□ 0.09
CLN3-255ENST00000637100 GNPTGQ9UJJ9 305 aa15.62■□□□□ 0.09
CLN3-255ENST00000637100 PCDHGB6Q9Y5F9 930 aa15.62■□□□□ 0.09
CLN3-255ENST00000637100 DCHS2Q6V1P9 2916 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 CPAMD8Q8IZJ3 1885 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 ARHGAP10A1A4S6 786 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 KRT87PA6NCN2 255 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 PRSS44E7EML9 344 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 MYO1CO00159 1063 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 PRPF4O43172 522 aaKnown RBP eCLIP15.61■□□□□ 0.09
CLN3-255ENST00000637100 KRT38O76015 456 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 IPO7O95373 1038 aaKnown RBP15.61■□□□□ 0.09
CLN3-255ENST00000637100 CYC1P08574 325 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 FBLP22087 321 aaKnown RBP15.61■□□□□ 0.09
CLN3-255ENST00000637100 PTGER4P35408 488 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 BDKRB1P46663 353 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 KCNK10P57789 538 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 ARG2P78540 354 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 FAM53BQ14153 422 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 FASTKQ14296 549 aaKnown RBP15.61■□□□□ 0.09
CLN3-255ENST00000637100 PCOLCEQ15113 449 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 TYSND1Q2T9J0 566 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 PTRHD1Q6GMV3 140 aaKnown RBP15.61■□□□□ 0.09
CLN3-255ENST00000637100 OTOAQ7RTW8 1153 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 MOCOSQ96EN8 888 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 MKKSQ9NPJ1 570 aaPredicted RBP15.61■□□□□ 0.09
CLN3-255ENST00000637100 RAB6BQ9NRW1 208 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 RIC8BQ9NVN3 520 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 PLA2G3Q9NZ20 509 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 PTGFRNQ9P2B2 879 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 MYO7BQ6PIF6 2116 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 TACC2O95359 2948 aa15.61■□□□□ 0.09
CLN3-255ENST00000637100 PSIP1O75475 530 aaKnown RBP15.6■□□□□ 0.09
CLN3-255ENST00000637100 ICAM2P13598 275 aa15.6■□□□□ 0.09
CLN3-255ENST00000637100 MST1P26927 711 aa15.6■□□□□ 0.09
CLN3-255ENST00000637100 GRNP28799 593 aaKnown RBP15.6■□□□□ 0.09
CLN3-255ENST00000637100 CMPK1P30085 196 aa15.6■□□□□ 0.09
CLN3-255ENST00000637100 CA7P43166 264 aa15.6■□□□□ 0.09
CLN3-255ENST00000637100 AP2B1P63010 937 aa15.6■□□□□ 0.09
CLN3-255ENST00000637100 PRDX1Q06830 199 aaKnown RBP15.6■□□□□ 0.09
CLN3-255ENST00000637100 ZNF630Q2M218 657 aaPredicted RBP15.6■□□□□ 0.09
CLN3-255ENST00000637100 H3F3CQ6NXT2 135 aa15.6■□□□□ 0.09
CLN3-255ENST00000637100 BNC2Q6ZN30 1099 aaPredicted RBP15.6■□□□□ 0.09
CLN3-255ENST00000637100 TMEM139Q8IV31 216 aa15.6■□□□□ 0.09
CLN3-255ENST00000637100 ZNF808Q8N4W9 903 aaPredicted RBP15.6■□□□□ 0.09
CLN3-255ENST00000637100 FBXO15Q8NCQ5 510 aaPredicted RBP15.6■□□□□ 0.09
CLN3-255ENST00000637100 PPHLN1Q8NEY8 458 aaKnown RBP15.6■□□□□ 0.09
CLN3-255ENST00000637100 OR9A1PQ8NGU1 263 aa15.6■□□□□ 0.09
CLN3-255ENST00000637100 SMPDL3AQ92484 453 aa15.6■□□□□ 0.09
CLN3-255ENST00000637100 LPGAT1Q92604 370 aa15.6■□□□□ 0.09
CLN3-255ENST00000637100 CCDC120Q96HB5 630 aa15.6■□□□□ 0.09
CLN3-255ENST00000637100 TCF12Q99081 682 aa15.6■□□□□ 0.09
CLN3-255ENST00000637100 KIFC1Q9BW19 673 aa15.6■□□□□ 0.09
CLN3-255ENST00000637100 IL22Q9GZX6 179 aa15.6■□□□□ 0.09
CLN3-255ENST00000637100 PAK5Q9P286 719 aa15.6■□□□□ 0.09
CLN3-255ENST00000637100 STOX2Q9P2F5 926 aaPredicted RBP15.6■□□□□ 0.09
CLN3-255ENST00000637100 TRPC4Q9UBN4 977 aa15.6■□□□□ 0.09
CLN3-255ENST00000637100 RUVBL2Q9Y230 463 aaKnown RBP15.6■□□□□ 0.09
CLN3-255ENST00000637100 RUVBL1Q9Y265 456 aaKnown RBP15.6■□□□□ 0.09
CLN3-255ENST00000637100 WDPCPO95876 746 aa15.59■□□□□ 0.09
CLN3-255ENST00000637100 FTCDO95954 541 aa15.59■□□□□ 0.09
CLN3-255ENST00000637100 CRYABP02511 175 aaKnown RBP15.59■□□□□ 0.09
CLN3-255ENST00000637100 PTMAP06454 111 aaKnown RBP15.59■□□□□ 0.09
CLN3-255ENST00000637100 APRTP07741 180 aa15.59■□□□□ 0.09
CLN3-255ENST00000637100 ITGAMP11215 1152 aa15.59■□□□□ 0.09
CLN3-255ENST00000637100 ETS1P14921 441 aa15.59■□□□□ 0.09
CLN3-255ENST00000637100 AGAP20933 346 aa15.59■□□□□ 0.09
CLN3-255ENST00000637100 CXCR2P25025 360 aa15.59■□□□□ 0.09
CLN3-255ENST00000637100 NPY2RP49146 381 aa15.59■□□□□ 0.09
CLN3-255ENST00000637100 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.59■□□□□ 0.09
CLN3-255ENST00000637100 ARMC3Q5W041 872 aa15.59■□□□□ 0.09
CLN3-255ENST00000637100 MTFR2Q6P444 385 aa15.59■□□□□ 0.09
CLN3-255ENST00000637100 DRICH1Q6PGQ1 229 aaPredicted RBP15.59■□□□□ 0.09
CLN3-255ENST00000637100 CNSTQ6PJW8 725 aa15.59■□□□□ 0.09
CLN3-255ENST00000637100 GFRALQ6UXV0 394 aa15.59■□□□□ 0.09
CLN3-255ENST00000637100 RPTNQ6XPR3 784 aa15.59■□□□□ 0.09
CLN3-255ENST00000637100 ZC3H7AQ8IWR0 971 aaKnown RBP15.59■□□□□ 0.09
CLN3-255ENST00000637100 PRSS58Q8IYP2 241 aa15.59■□□□□ 0.09
CLN3-255ENST00000637100 SIRT6Q8N6T7 355 aa15.59■□□□□ 0.09
CLN3-255ENST00000637100 GSDMBQ8TAX9 411 aa15.59■□□□□ 0.09
CLN3-255ENST00000637100 FOPNLQ96NB1 174 aa15.59■□□□□ 0.09
CLN3-255ENST00000637100 CHST11Q9NPF2 352 aa15.59■□□□□ 0.09
CLN3-255ENST00000637100 POLQO75417 2590 aa15.59■□□□□ 0.09
CLN3-255ENST00000637100 A0A0U1RQJ8 604 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 OR5H15A6NDH6 313 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 ARHGEF33A8MVX0 844 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 E7EVH7 732 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 H3BMM5 538 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 AP3B1O00203 1094 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 TXNDC9O14530 226 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 VPS26AO75436 327 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 NDUFS3O75489 264 aa15.58■□□□□ 0.08
CLN3-255ENST00000637100 WFS1O76024 890 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms