RNA–Protein interactions for RNA: ENST00000635293.1

TP53-228, Transcript of tumor protein p53, humanhuman

TSL 5

Gene TP53, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-228ENST00000635293 MAPRE3Q9UPY8 281 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 RUVBL1Q9Y265 456 aaKnown RBP11.25□□□□□ -0.61
TP53-228ENST00000635293 MRPS17Q9Y2R5 130 aaKnown RBP11.25□□□□□ -0.61
TP53-228ENST00000635293 HEBP2Q9Y5Z4 205 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 FUCA1P04066 466 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 IL6P05231 212 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 CHRNB1P11230 501 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 AMD1P17707 334 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 HTR1BP28222 390 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 NEK2P51955 445 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 CLDN8P56748 225 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 SLBPQ14493 270 aaKnown RBP eCLIP11.25□□□□□ -0.61
TP53-228ENST00000635293 PTGR1Q14914 329 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 UAP1L1Q3KQV9 507 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 PTCRAQ6ISU1 281 aaPredicted RBP11.25□□□□□ -0.61
TP53-228ENST00000635293 ZFP1Q6P2D0 407 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 NXPE4Q6UWF7 544 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 SUSD1Q6UWL2 747 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 LAYNQ6UX15 382 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 MSANTD1Q6ZTZ1 278 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 EFCAB3Q8N7B9 438 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 DNAJB8Q8NHS0 232 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 SMPDL3AQ92484 453 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 STARD8Q92502 1023 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 VPS33AQ96AX1 596 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 C12orf66Q96MD2 445 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 MYOCQ99972 504 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 PITHD1Q9GZP4 211 aaPredicted RBP11.25□□□□□ -0.61
TP53-228ENST00000635293 VPS29Q9UBQ0 182 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 TDRKHQ9Y2W6 561 aaKnown RBP11.25□□□□□ -0.61
TP53-228ENST00000635293 HS3ST3A1Q9Y663 406 aa11.25□□□□□ -0.61
TP53-228ENST00000635293 CDH23Q9H251 3354 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 PIPSLA2A3N6 862 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 FOXE1O00358 373 aaPredicted RBP11.24□□□□□ -0.61
TP53-228ENST00000635293 DNAJA2O60884 412 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 MYO1DO94832 1006 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 SORBS2O94875 1100 aaKnown RBP11.24□□□□□ -0.61
TP53-228ENST00000635293 STAMBPO95630 424 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 HSD17B1P14061 328 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 SDC1P18827 310 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 OXTRP30559 389 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 SERPINB1P30740 379 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 ERFP50548 548 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 C21orf58P58505 322 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 BNIP2Q12982 314 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 TSTA3Q13630 321 aaPredicted RBP11.24□□□□□ -0.61
TP53-228ENST00000635293 TRIM25Q14258 630 aaKnown RBP11.24□□□□□ -0.61
TP53-228ENST00000635293 DPY19L1Q2PZI1 675 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 SPIN4Q56A73 249 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 THEMIS2Q5TEJ8 643 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 GCNT7Q6ZNI0 430 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 Q6ZS52 159 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 DHDDSQ86SQ9 333 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 C17orf64Q86WR6 236 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 APLFQ8IW19 511 aaPredicted RBP11.24□□□□□ -0.61
TP53-228ENST00000635293 KBTBD2Q8IY47 623 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 ZNF687Q8N1G0 1237 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 OR7G3Q8NG95 312 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 SLC13A3Q8WWT9 602 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 PYDC1Q8WXC3 89 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 TESCQ96BS2 214 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 ECSITQ9BQ95 431 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 MENTQ9BUN1 341 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 CD93Q9NPY3 652 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 MOSPD1Q9UJG1 213 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 DMTF1Q9Y222 760 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 KCNK6Q9Y257 313 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 GPSM3Q9Y4H4 160 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 PLXND1Q9Y4D7 1925 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 REV3LO60673 3130 aa11.24□□□□□ -0.61
TP53-228ENST00000635293 POM121BA6NF01 834 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 NME4O00746 187 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 ACOT8O14734 319 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 PCNAP12004 261 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 FOSL2P15408 326 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 CD72P21854 359 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 SLC6A2P23975 617 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 PKLRP30613 574 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 PIK3CBP42338 1070 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 HNRNPFP52597 415 aaKnown RBP11.23□□□□□ -0.61
TP53-228ENST00000635293 ACSM2AQ08AH3 577 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 PAGE3Q5JUK9 113 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 ACSM2BQ68CK6 577 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 KIAA0895LQ68EN5 471 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 WASH2PQ6VEQ5 465 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 KRT78Q8N1N4 520 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 TMEM145Q8NBT3 493 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 HUS1BQ8NHY5 278 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 APIPQ96GX9 242 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 SLC45A3Q96JT2 553 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 APOLD1Q96LR9 279 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 IL17FQ96PD4 163 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 NR1H4Q96RI1 486 aaPredicted RBP11.23□□□□□ -0.61
TP53-228ENST00000635293 FERD3LQ96RJ6 166 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 INSM2Q96T92 566 aaPredicted RBP11.23□□□□□ -0.61
TP53-228ENST00000635293 CDX2Q99626 313 aaPredicted RBP11.23□□□□□ -0.61
TP53-228ENST00000635293 VCXQ9H320 206 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 VCX3BQ9H321 246 aa11.23□□□□□ -0.61
TP53-228ENST00000635293 CARS2Q9HA77 564 aaKnown RBP11.23□□□□□ -0.61
TP53-228ENST00000635293 WASH6PQ9NQA3 447 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms