RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 BMFQ96LC9 184 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 CCDC138Q96M89 665 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 TIMM29Q9BSF4 260 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 RAB11FIP5Q9BXF6 653 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 INTS7Q9NVH2 962 aaKnown RBP12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 RIMS3Q9UJD0 308 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 CCDC163A0A0D9SF12 145 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 PIPSLA2A3N6 862 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 KCNJ13O60928 360 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 LYNP07948 512 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 GDF5P43026 501 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 PPP1R3AQ16821 1122 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 FAM129CQ86XR2 697 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 TCAIMQ8N3R3 496 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 OR9A1PQ8NGU1 263 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 LKAAEAR1Q8TD35 194 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 EDEM2Q9BV94 578 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 COL25A1Q9BXS0 654 aaPredicted RBP12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 TAC3Q9UHF0 121 aa12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 TDRD6O60522 2096 aaKnown RBP12.07□□□□□ -0.48
SYNGAP1-207ENST00000628646 C15orf38-AP3S2A0A0A6YYH1 394 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 OR6C74A6NCV1 312 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 TNFRSF10CO14798 259 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 F3P13726 295 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 FDXRP22570 491 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 CXCR2P25025 360 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 MAZP56270 477 aaKnown RBP12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 AP1S2P56377 157 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 NFKB2Q00653 900 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 CTSL3PQ5NE16 218 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 CACHD1Q5VU97 1274 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 SULT1C3Q6IMI6 304 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 MBOAT1Q6ZNC8 495 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 ARPINQ7Z6K5 226 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 PGAM4Q8N0Y7 254 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 CD200R1Q8TD46 325 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 L3HYPDHQ96EM0 354 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 NLNQ9BYT8 704 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 DLGAP2Q9P1A6 1054 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 FTSJ1Q9UET6 329 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 BAG5Q9UL15 447 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 PCDHGA7Q9Y5G6 932 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 TICRRQ7Z2Z1 1910 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 CHD9Q3L8U1 2897 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 SPTY2D1-AS1A0A0U1RR47 76 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 PEX1O43933 1283 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 MTHFD2P13995 350 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 HLA-BQ31612 363 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 ATP6AP1LQ52LC2 224 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 TMTC4Q5T4D3 741 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 RNF220Q5VTB9 566 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 AGTRAPQ6RW13 159 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 SCIMPQ6UWF3 145 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 SELENOMQ8WWX9 145 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 SMPDL3AQ92484 453 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 DUSP23Q9BVJ7 150 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 DERL2Q9GZP9 239 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 CCDC167Q9P0B6 97 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 GVINP1Q7Z2Y8 2422 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 BBIP1A8MTZ0 92 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 SIX3O95343 332 aaPredicted RBP12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 PCSK2P16519 638 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 BNIP3Q12983 259 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 LCP2Q13094 533 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 PMS2CLQ68D20 193 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 GCNT7Q6ZNI0 430 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 SPATA19Q7Z5L4 167 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 MINDY1Q8N5J2 469 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 DUSP15Q9H1R2 295 aaPredicted RBP12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 TCEAL2Q9H3H9 227 aaPredicted RBP12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 SLC32A1Q9H598 525 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 IPPKQ9H8X2 491 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 DNMT3AQ9Y6K1 912 aaPredicted RBP12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 TOR1BO14657 336 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 CCNDBP1O95273 360 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 IGHV4-34P06331 123 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 CEACAM5P06731 702 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 GSTM1P09488 218 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 MAPK1P28482 360 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 PKNOX1P55347 436 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 GSTM4Q03013 218 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 PYCR3Q53H96 274 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 GPRIN3Q6ZVF9 776 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 SLC22A18Q96BI1 424 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 TGM7Q96PF1 710 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 MVB12BQ9H7P6 319 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 MRPS30Q9NP92 439 aaKnown RBP12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 IKZF3Q9UKT9 509 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 SLC22A14Q9Y267 594 aa12.06□□□□□ -0.48
SYNGAP1-207ENST00000628646 SCN8AQ9UQD0 1980 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 PRR33A8MZF0 331 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 HERVK_113P63132 956 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 RPA4Q13156 261 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 NR6A1Q15406 480 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 TGFBIQ15582 683 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 PTCHD3Q3KNS1 767 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 TCEAL6Q6IPX3 200 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 LARP4Q71RC2 724 aaKnown RBP eCLIP12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 TNIP2Q8NFZ5 429 aa12.05□□□□□ -0.48
SYNGAP1-207ENST00000628646 RHEBL1Q8TAI7 183 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms