RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 CYP4F2P78329 520 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 INO80DQ53TQ3 878 aaPredicted RBP13.7□□□□□ -0.22
LDB3-209ENST00000623056 ARMCX6Q7L4S7 300 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 ZSWIM9Q86XI8 627 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 SPATA2LQ8IUW3 424 aaPredicted RBP13.7□□□□□ -0.22
LDB3-209ENST00000623056 SETD6Q8TBK2 473 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 MS4A4AQ96JQ5 239 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 ZFYVE19Q96K21 471 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 RPRD1AQ96P16 312 aaPredicted RBP13.7□□□□□ -0.22
LDB3-209ENST00000623056 COL21A1Q96P44 957 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 RAD18Q9NS91 495 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 NLRC5Q86WI3 1866 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 SLC12A8A0AV02 714 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 KRT87PA6NCN2 255 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 GPR39O43194 453 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 TSPAN3O60637 253 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 SLITRK5O94991 958 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 PSMA3P25788 255 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 RPL9P32969 192 aaKnown RBP13.7□□□□□ -0.22
LDB3-209ENST00000623056 TNFSF8P32971 234 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 CLDN8P56748 225 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 IRF3Q14653 427 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 RFPL4BQ6ZWI9 263 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 SERPINA11Q86U17 422 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 SCN4BQ8IWT1 228 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 ZZZ3Q8IYH5 903 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 BRI3BPQ8WY22 251 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 MTFMTQ96DP5 389 aaKnown RBP13.7□□□□□ -0.22
LDB3-209ENST00000623056 PDFQ9HBH1 243 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 FAM105AQ9NUU6 356 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 CFL2Q9Y281 166 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 DHRS7Q9Y394 339 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 GPSM3Q9Y4H4 160 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 ARIH1Q9Y4X5 557 aaPredicted RBP13.7□□□□□ -0.22
LDB3-209ENST00000623056 KLK4Q9Y5K2 254 aa13.7□□□□□ -0.22
LDB3-209ENST00000623056 HMX3A6NHT5 357 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 TLR5O60602 858 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 AOC2O75106 756 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 UGT2B17O75795 530 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 B3GAT3O94766 335 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 WDR47O94967 919 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 GLUD1P00367 558 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 ESR1P03372 595 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 CYP2A7P20853 494 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 LPOP22079 712 aaPredicted RBP13.69□□□□□ -0.22
LDB3-209ENST00000623056 KDELR2P33947 212 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 HNF4AP41235 474 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 RGRP47804 291 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 EFEMP1Q12805 493 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 TP53BP2Q13625 1128 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 VMACQ2NL98 169 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 Q5BKY6 102 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 ALG1LQ6GMV1 187 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 SIGIRRQ6IA17 410 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 RNF165Q6ZSG1 346 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 ZNF438Q7Z4V0 828 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 PGBD3Q8N328 593 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 STX19Q8N4C7 294 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 FLCNQ8NFG4 579 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 ST13P5Q8NFI4 369 aaPredicted RBP13.69□□□□□ -0.22
LDB3-209ENST00000623056 MYEOVQ96EZ4 313 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 MED30Q96HR3 178 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 CLPBQ9H078 707 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 PPT2Q9UMR5 302 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 ZNF451Q9Y4E5 1061 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 PCDHGB2Q9Y5G2 931 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 MEIOCA2RUB1 952 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 DRGXA6NNA5 263 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 LOC730098B7Z3J9 87 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 ERVH48-1M5A8F1 160 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 HAS3O00219 553 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 RFXANKO14593 260 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 CYP7B1O75881 506 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 KCNK5O95279 499 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 ITGA2P17301 1181 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 TIE1P35590 1138 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 SLAMF1Q13291 335 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 IQCCQ4KMZ1 466 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 YIF1BQ5BJH7 314 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 ARMC4Q5T2S8 1044 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 C10orf62Q5T681 223 aaPredicted RBP13.69□□□□□ -0.22
LDB3-209ENST00000623056 SDHAF4Q5VUM1 108 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 OVOS1Q6IE37 1185 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 PDE12Q6L8Q7 609 aaKnown RBP13.69□□□□□ -0.22
LDB3-209ENST00000623056 NEK5Q6P3R8 708 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 CBLL1Q75N03 491 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 EIF3MQ7L2H7 374 aaKnown RBP13.69□□□□□ -0.22
LDB3-209ENST00000623056 GPRC5AQ8NFJ5 357 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 JPH3Q8WXH2 748 aaPredicted RBP13.69□□□□□ -0.22
LDB3-209ENST00000623056 TRIM63Q969Q1 353 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 EXOC2Q96KP1 924 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 TRNT1Q96Q11 434 aaKnown RBP13.69□□□□□ -0.22
LDB3-209ENST00000623056 MGME1Q9BQP7 344 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 RRAGCQ9HB90 399 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 CENPFP49454 3210 aa13.69□□□□□ -0.22
LDB3-209ENST00000623056 CRYZL1O95825 349 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 PRLP01236 227 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 ABCB1P08183 1280 aaPredicted RBP13.68□□□□□ -0.22
LDB3-209ENST00000623056 HMBSP08397 361 aa13.68□□□□□ -0.22
LDB3-209ENST00000623056 PTGER3P43115 390 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms