RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 PDP1Q9P0J1 537 aaPredicted RBP8.98□□□□□ -0.97
GGA3-223ENST00000621870 PTGFRNQ9P2B2 879 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 UTS2RQ9UKP6 389 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 CACNA1CQ13936 2221 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 CPSF4LA6NMK7 179 aaKnown RBP8.98□□□□□ -0.97
GGA3-223ENST00000621870 OR5K4A6NMS3 321 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 TNFRSF11BO00300 401 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 VEGFDO43915 354 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 IFNGP01579 166 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 NR2F6P10588 404 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 ANPEPP15144 967 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 GMPRP36959 345 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 PTDSS1P48651 473 aaKnown RBP8.98□□□□□ -0.97
GGA3-223ENST00000621870 GALK1P51570 392 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 LSM3P62310 102 aaKnown RBP8.98□□□□□ -0.97
GGA3-223ENST00000621870 DYNC1I2Q13409 638 aaKnown RBP8.98□□□□□ -0.97
GGA3-223ENST00000621870 GRIN2CQ14957 1233 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 SGCBQ16585 318 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 NCEH1Q6PIU2 408 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 PTCHD4Q6ZW05 846 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 ZNF572Q7Z3I7 529 aaPredicted RBP8.98□□□□□ -0.97
GGA3-223ENST00000621870 PQLC1Q8N2U9 271 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 PARP8Q8N3A8 854 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 PLA2G15Q8NCC3 412 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 PGAP3Q96FM1 320 aaPredicted RBP8.98□□□□□ -0.97
GGA3-223ENST00000621870 ZDHHC12Q96GR4 267 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 ART5Q96L15 291 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 BOCQ9BWV1 1114 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 CDADC1Q9BWV3 514 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 CRISPLD1Q9H336 500 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 FBRSL1Q9HCM7 1045 aaKnown RBP8.98□□□□□ -0.97
GGA3-223ENST00000621870 CSNK1G1Q9HCP0 422 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 MARCH5Q9NX47 278 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 NDUFA13Q9P0J0 144 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 ZNF624Q9P2J8 865 aaPredicted RBP8.98□□□□□ -0.97
GGA3-223ENST00000621870 FTSJ1Q9UET6 329 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 DUXAA6NLW8 204 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 CLIC1O00299 241 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 BTN3A3O00478 584 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 KPNA4O00629 521 aaPredicted RBP8.98□□□□□ -0.97
GGA3-223ENST00000621870 OPN1SWP03999 348 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 CYP17A1P05093 508 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 HNRNPA2B1P22626 353 aaKnown RBP8.98□□□□□ -0.97
GGA3-223ENST00000621870 HLA-FP30511 346 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 PTPN5P54829 565 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 LASP1Q14847 261 aaKnown RBP8.98□□□□□ -0.97
GGA3-223ENST00000621870 SNAPC1Q16533 368 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 DCST1Q5T197 706 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 LHX8Q68G74 356 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 RANBP10Q6VN20 620 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 ANKRD33Q7Z3H0 272 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 HIPK1Q86Z02 1210 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 HSPA12BQ96MM6 686 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 SLC39A3Q9BRY0 314 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 KCNH6Q9H252 994 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 SERHL2Q9H4I8 314 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 PDE7BQ9NP56 450 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 SERHLQ9NQF3 203 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 MOCS1Q9NZB8 636 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 ZNF282Q9UDV7 671 aaPredicted RBP8.98□□□□□ -0.97
GGA3-223ENST00000621870 SPO11Q9Y5K1 396 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 NUMBLQ9Y6R0 609 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 SMCHD1A6NHR9 2005 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 EVPLQ92817 2033 aa8.98□□□□□ -0.97
GGA3-223ENST00000621870 ARHGEF9O43307 516 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 PRAMEF12O95522 483 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 CRISP3P54108 245 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 MRPL28Q13084 256 aaKnown RBP8.97□□□□□ -0.97
GGA3-223ENST00000621870 RFX4Q33E94 735 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 HTR3DQ70Z44 454 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 TMEM135Q86UB9 458 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 TDHQ8IZJ6 230 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 FAM13CQ8NE31 585 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 OR2T34Q8NGX1 318 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 TOE1Q96GM8 510 aaKnown RBP8.97□□□□□ -0.97
GGA3-223ENST00000621870 NSMCE3Q96MG7 304 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 Q96MT0 163 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 PTCHD1Q96NR3 888 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 NECTIN3Q9NQS3 549 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 CDH22Q9UJ99 828 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 USP3Q9Y6I4 520 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 WASF2Q9Y6W5 498 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 NPIPB15A6NHN6 443 aaPredicted RBP8.97□□□□□ -0.97
GGA3-223ENST00000621870 C2orf74A8MZ97 194 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 G3V2T6 193 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 LILRB3O75022 631 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 TCEA3O75764 348 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 MFN2O95140 757 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 PGM3O95394 542 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 S1PR4O95977 384 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 BCL10O95999 233 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 GIMD1P0DJR0 217 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 ACRV1P26436 265 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 OXTRP30559 389 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 CCR10P46092 362 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 ZNF267Q14586 743 aaPredicted RBP8.97□□□□□ -0.97
GGA3-223ENST00000621870 TCEAL1Q15170 157 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 SPIN4Q56A73 249 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 FAM26DQ5JW98 314 aa8.97□□□□□ -0.97
GGA3-223ENST00000621870 OR4K1Q8NGD4 311 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms