RNA–Protein interactions for RNA: ENST00000621856.1

SPAST-204, Transcript of spastin, humanhuman

TSL 1 (best) BASIC

Gene SPAST, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-204ENST00000621856 C10orf142B7Z368 130 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 TOR1BO14657 336 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 ZNF217O75362 1048 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 EEDO75530 441 aaKnown RBP20.71■□□□□ 0.91
SPAST-204ENST00000621856 PRPS2P11908 318 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 CDH1P12830 882 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 SRP54P61011 504 aaKnown RBP20.71■□□□□ 0.91
SPAST-204ENST00000621856 FZD5Q13467 585 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 NFYCQ13952 458 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 CEACAM7Q14002 265 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 RPE65Q16518 533 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 ZNF423Q2M1K9 1284 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 GPR153Q6NV75 609 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 C17orf64Q86WR6 236 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 RNF148Q8N7C7 305 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 SNX19Q92543 992 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 BIRC7Q96CA5 298 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 APOLD1Q96LR9 279 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 NELL2Q99435 816 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 DCLRE1BQ9H816 532 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 BRF2Q9HAW0 419 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 SPAG4Q9NPE6 437 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 PRDM6Q9NQX0 595 aa20.71■□□□□ 0.91
SPAST-204ENST00000621856 SPATA6Q9NWH7 488 aaPredicted RBP20.71■□□□□ 0.91
SPAST-204ENST00000621856 GEMIN8Q9NWZ8 242 aaKnown RBP20.71■□□□□ 0.91
SPAST-204ENST00000621856 PIPSLA2A3N6 862 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 KRT36O76013 467 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 PSMG1O95456 288 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 AMD1P17707 334 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 ME2P23368 584 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 AK4P27144 223 aaPredicted RBP20.7■□□□□ 0.9
SPAST-204ENST00000621856 RABIFP47224 123 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 ERFP50548 548 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 CTBSQ01459 385 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 ZP2Q05996 745 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 PRMT9Q6P2P2 845 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 HID1Q8IV36 788 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 OR13H1Q8NG92 308 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 CLHC1Q8NHS4 586 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 HUS1BQ8NHY5 278 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 RLN3Q8WXF3 142 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 HOPXQ9BPY8 73 aaPredicted RBP20.7■□□□□ 0.9
SPAST-204ENST00000621856 MENTQ9BUN1 341 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 RAB11FIP5Q9BXF6 653 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 PCBD2Q9H0N5 130 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 DLGAP4Q9Y2H0 992 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 HEBP2Q9Y5Z4 205 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 ASPDHA6ND91 283 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 MAGEB17A8MXT2 336 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 TRIM38O00635 465 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 MTHFD1P11586 935 aaKnown RBP20.7■□□□□ 0.9
SPAST-204ENST00000621856 MEF2AQ02078 507 aaPredicted RBP20.7■□□□□ 0.9
SPAST-204ENST00000621856 ALG11Q2TAA5 492 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 PRPF38BQ5VTL8 546 aaKnown RBP20.7■□□□□ 0.9
SPAST-204ENST00000621856 ADNP2Q6IQ32 1131 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 C8orf82Q6P1X6 216 aaPredicted RBP20.7■□□□□ 0.9
SPAST-204ENST00000621856 LPCAT2Q7L5N7 544 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 ABI3BPQ7Z7G0 1075 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 FAM9CQ8IZT9 166 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 SLC39A3Q9BRY0 314 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 NKX1-2Q9UD57 310 aaPredicted RBP20.7■□□□□ 0.9
SPAST-204ENST00000621856 TBC1D29Q9UFV1 150 aa20.7■□□□□ 0.9
SPAST-204ENST00000621856 STK25O00506 426 aa20.69■□□□□ 0.9
SPAST-204ENST00000621856 DGKQP52824 942 aa20.69■□□□□ 0.9
SPAST-204ENST00000621856 RCN1Q15293 331 aa20.69■□□□□ 0.9
SPAST-204ENST00000621856 TLR1Q15399 786 aa20.69■□□□□ 0.9
SPAST-204ENST00000621856 PAGE3Q5JUK9 113 aa20.69■□□□□ 0.9
SPAST-204ENST00000621856 NOXRED1Q6NXP6 359 aa20.69■□□□□ 0.9
SPAST-204ENST00000621856 FAM160A2Q8N612 972 aaPredicted RBP20.69■□□□□ 0.9
SPAST-204ENST00000621856 FRMD1Q8N878 549 aa20.69■□□□□ 0.9
SPAST-204ENST00000621856 GLB1L3Q8NCI6 653 aaPredicted RBP20.69■□□□□ 0.9
SPAST-204ENST00000621856 UBE2E3Q969T4 207 aa20.69■□□□□ 0.9
SPAST-204ENST00000621856 LRRC58Q96CX6 371 aa20.69■□□□□ 0.9
SPAST-204ENST00000621856 TMEM168Q9H0V1 697 aa20.69■□□□□ 0.9
SPAST-204ENST00000621856 XKR8Q9H6D3 395 aa20.69■□□□□ 0.9
SPAST-204ENST00000621856 SCHIP1Q9P0W5 487 aaPredicted RBP20.69■□□□□ 0.9
SPAST-204ENST00000621856 IGHV1OR15-9A0A0B4J2B8 117 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 SH3BGRLO75368 114 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 MYO1DO94832 1006 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 ACPPP15309 386 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 XRCC1P18887 633 aaPredicted RBP20.68■□□□□ 0.9
SPAST-204ENST00000621856 PKLRP30613 574 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 NUDT1P36639 197 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 ACTR1BP42025 376 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 RAB28P51157 221 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 SLC7A2P52569 658 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 ACTR1AP61163 376 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 RPS13P62277 151 aaKnown RBP20.68■□□□□ 0.9
SPAST-204ENST00000621856 PHEXP78562 749 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 FOXM1Q08050 763 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 ACSM2AQ08AH3 577 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 CAPRIN1Q14444 709 aaKnown RBP20.68■□□□□ 0.9
SPAST-204ENST00000621856 C10orf62Q5T681 223 aaPredicted RBP20.68■□□□□ 0.9
SPAST-204ENST00000621856 ACSM2BQ68CK6 577 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 SLC30A9Q6PML9 568 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 SLC2A7Q6PXP3 512 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 LAS2Q8IYD9 372 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 PHACTR4Q8IZ21 702 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 KRT78Q8N1N4 520 aa20.68■□□□□ 0.9
SPAST-204ENST00000621856 MINDY1Q8N5J2 469 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms