RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 C16orf72Q14CZ0 275 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 TPGS2Q68CL5 300 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 LRRC66Q68CR7 880 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 METTL3Q86U44 580 aaKnown RBP8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 HIPK1Q86Z02 1210 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 LRRC58Q96CX6 371 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 TMEM74Q96NL1 305 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 FNDC11Q9BVV2 318 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 SLC2A11Q9BYW1 496 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 HDHD2Q9H0R4 259 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 LEF1Q9UJU2 399 aaPredicted RBP8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 RWDD3Q9Y3V2 267 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 WASH3PC4AMC7 463 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 ARPC2O15144 300 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 REM1O75628 298 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 KLF8O95600 359 aaPredicted RBP8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 STT3AP46977 705 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 MS4A13Q5J8X5 152 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 TTLL10Q6ZVT0 673 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 ZNF605Q86T29 641 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 TMEM25Q86YD3 366 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 IGSF8Q969P0 613 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 TIFAQ96CG3 184 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 HOPXQ9BPY8 73 aaPredicted RBP8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 KRCC1Q9NPI7 259 aaPredicted RBP8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 TIMMDC1Q9NPL8 285 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 TAC3Q9UHF0 121 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 PHF24Q9UPV7 400 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 TLR6Q9Y2C9 796 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 BBIP1A8MTZ0 92 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 CDC7O00311 574 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 QSOX1O00391 747 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 IGLV3-25P01717 112 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 SOD2P04179 222 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 PRG2P13727 222 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 ACADVLP49748 655 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 YBX1P67809 324 aaKnown RBP8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 TNK2Q07912 1038 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 MERTKQ12866 999 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 MANEALQ5VSG8 457 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 CERS6Q6ZMG9 384 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 CYHR1Q6ZMK1 362 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 EGFL6Q8IUX8 553 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 CELF5Q8N6W0 485 aaKnown RBP8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 OSCP1Q8WVF1 389 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 TFGQ92734 400 aaPredicted RBP8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 ACDQ96AP0 544 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 HSPBAP1Q96EW2 488 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 C9orf16Q9BUW7 83 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 UGT2B28Q9BY64 529 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 TRIT1Q9H3H1 467 aaKnown RBP8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 RC3H2Q9HBD1 1191 aaKnown RBP8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 PNO1Q9NRX1 252 aaKnown RBP8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 CMTM6Q9NX76 183 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 EBF1Q9UH73 591 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 COLEC10Q9Y6Z7 277 aa8.06□□□□□ -1.12
PTPDC1-204ENST00000620992 PDCD11Q14690 1871 aaKnown RBP8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 A0A1B0GTL3 188 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 HEPACAM2A8MVW5 462 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 KHNYNO15037 678 aaKnown RBP8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 SRP54P61011 504 aaKnown RBP8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 ZSWIM7Q19AV6 140 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 FAM174BQ3ZCQ3 159 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 INTS11Q5TA45 600 aaKnown RBP8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 GPR107Q5VW38 600 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 ZNF549Q6P9A3 640 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 C11orf88Q6PI97 169 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 SLC39A5Q6ZMH5 540 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 RASGRP3Q8IV61 690 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 CMTR2Q8IYT2 770 aaKnown RBP8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 NAXEQ8NCW5 288 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 ZNF248Q8NDW4 579 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 OR2T12Q8NG77 320 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 UHRF1Q96T88 793 aaPredicted RBP8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 S100A13Q99584 98 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 CCM2LQ9NUG4 571 aaPredicted RBP8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 SPATA6Q9NWH7 488 aaPredicted RBP8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 IKZF2Q9UKS7 526 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 FADS3Q9Y5Q0 445 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 CLDN4O14493 209 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 MYL12BO14950 172 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 MAGEB3O15480 346 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 LEFTY1O75610 366 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 RECQL5O94762 991 aaPredicted RBP8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 CLDN9O95484 217 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 MAOBP27338 520 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 PRDX3P30048 256 aaKnown RBP8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 AGTR2P50052 363 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 LIPEQ05469 1076 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 MRPL28Q13084 256 aaKnown RBP8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 SEMA3AQ14563 771 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 IHHQ14623 411 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 RAB30Q15771 203 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 INAQ16352 499 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 KCTD21Q4G0X4 260 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 RNASE12Q5GAN4 147 aaKnown RBP8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 PRMT9Q6P2P2 845 aa8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 EIF3MQ7L2H7 374 aaKnown RBP8.05□□□□□ -1.12
PTPDC1-204ENST00000620992 NEK7Q8TDX7 302 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms