RNA–Protein interactions for RNA: ENST00000620197.4

SKP2-209, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2 BASIC

Gene SKP2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-209ENST00000620197 EPB42P16452 691 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 CD36P16671 472 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 KDELR2P33947 212 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 RPP38P78345 283 aaKnown RBP12.69□□□□□ -0.38
SKP2-209ENST00000620197 PCDH1Q08174 1060 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 LAPTM4AQ15012 233 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 SF3B4Q15427 424 aaKnown RBP eCLIP12.69□□□□□ -0.38
SKP2-209ENST00000620197 DUOXA1Q1HG43 343 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 DOK6Q6PKX4 331 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 SLC24A5Q71RS6 500 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 TAS2R42Q7RTR8 314 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 LRRC70Q7Z2Q7 622 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 SLC46A3Q7Z3Q1 461 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 CRIPAKQ8N1N5 446 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 WBP2Q969T9 261 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 RIBC2Q9H4K1 309 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 SLC32A1Q9H598 525 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 SARS2Q9NP81 518 aaKnown RBP12.69□□□□□ -0.38
SKP2-209ENST00000620197 SCN3BQ9NY72 215 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 ZNF840PA6NDX5 716 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 SAGE2PA6NJ88 616 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 GOLGA8CPA6NN73 597 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 A8MVJ9 347 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 COCHO43405 550 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 GUCA1CO95843 209 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 RHOCP08134 193 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 CTPS1P17812 591 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 CST5P28325 142 aaPredicted RBP12.69□□□□□ -0.38
SKP2-209ENST00000620197 BMPR1AP36894 532 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 SLC19A1P41440 591 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 SLC11A2P49281 568 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 FPGSQ05932 587 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 UGT8Q16880 541 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 ZNF404Q494X3 552 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 PNCKQ6P2M8 343 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 GLB1LQ6UWU2 654 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 MBOAT1Q6ZNC8 495 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 CAMKMTQ7Z624 323 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 FAM9CQ8IZT9 166 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 ZNF540Q8NDQ6 660 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 CLHC1Q8NHS4 586 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 LYSMD1Q96S90 227 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 SDHCQ99643 169 aaPredicted RBP12.69□□□□□ -0.38
SKP2-209ENST00000620197 QPCTLQ9NXS2 382 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 RBMX2Q9Y388 322 aaKnown RBP12.69□□□□□ -0.38
SKP2-209ENST00000620197 TESMINQ9Y4I5 508 aa12.69□□□□□ -0.38
SKP2-209ENST00000620197 A8MU76 341 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 PRMT3O60678 531 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 STK16O75716 305 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 SNX4O95219 450 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 CYP4B1P13584 511 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 SPNP16150 400 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 S100A3P33764 101 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 ATP5C1P36542 298 aaKnown RBP12.68□□□□□ -0.38
SKP2-209ENST00000620197 RGS4P49798 205 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 B4GALNT1Q00973 533 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 RNF219Q5W0B1 726 aaPredicted RBP12.68□□□□□ -0.38
SKP2-209ENST00000620197 ERICH5Q6P6B1 374 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 VTCN1Q7Z7D3 282 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 DNAJC22Q8N4W6 341 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 EFHBQ8N7U6 833 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 NCLNQ969V3 563 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 CCDC90BQ9GZT6 254 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 CLPBQ9H078 707 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 EPS8L2Q9H6S3 715 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 ZNF821O75541 412 aaPredicted RBP12.68□□□□□ -0.38
SKP2-209ENST00000620197 SEC24AO95486 1093 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 BPIP17213 487 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 CSNK1DP48730 415 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 CAMK2GQ13555 558 aaPredicted RBP12.68□□□□□ -0.38
SKP2-209ENST00000620197 ADGRF1Q5T601 910 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 SLX4IPQ5VYV7 408 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 ADCK1Q86TW2 530 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 CCDC103Q8IW40 242 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 KLHDC8AQ8IYD2 350 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 APIPQ96GX9 242 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 HSH2DQ96JZ2 352 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 KLF16Q9BXK1 252 aaPredicted RBP12.68□□□□□ -0.38
SKP2-209ENST00000620197 NACA2Q9H009 215 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 TPK1Q9H3S4 243 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 RMI1Q9H9A7 625 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 PDP1Q9P0J1 537 aaPredicted RBP12.68□□□□□ -0.38
SKP2-209ENST00000620197 RPS6KA6Q9UK32 745 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 CBX4O00257 560 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 C9P02748 559 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 CDK1P06493 297 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 ALPIP09923 528 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 HMGA1P17096 107 aaKnown RBP12.68□□□□□ -0.38
SKP2-209ENST00000620197 GGT2P36268 569 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 LIMS1P48059 325 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 LSM3P62310 102 aaKnown RBP12.68□□□□□ -0.38
SKP2-209ENST00000620197 ZNF33BQ06732 778 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 FAM151BQ6UXP7 276 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 DENND1CQ8IV53 801 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 CLDN19Q8N6F1 224 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 MYOCQ99972 504 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 SPON2Q9BUD6 331 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 DCSTAMPQ9H295 470 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 TMEM184CQ9NVA4 438 aa12.68□□□□□ -0.38
SKP2-209ENST00000620197 THUMPD1Q9NXG2 353 aaKnown RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms