RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 PDE12Q6L8Q7 609 aaKnown RBP6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 RETSATQ6NUM9 610 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 USP51Q70EK9 711 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 DET1Q7L5Y6 550 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 SYVN1Q86TM6 617 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 ZFAND4Q86XD8 727 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 SPNS2Q8IVW8 549 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 TMEM132CQ8N3T6 1108 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 PAPD5Q8NDF8 572 aaKnown RBP6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 BBS2Q9BXC9 721 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 TM6SF2Q9BZW4 377 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 FBRSQ9HAH7 460 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 ZFP14Q9HCL3 533 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 SCUBE2Q9NQ36 999 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 POLE4Q9NR33 117 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 USP22Q9UPT9 525 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 SHROOM3Q8TF72 1996 aa6.81□□□□□ -1.32
SRGAP3-213ENST00000618999 COL4A6Q14031 1691 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 PDZK1P1A8MUH7 402 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 EFCAB9A8MZ26 197 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 PSMD11O00231 422 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 STX16O14662 325 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 KDELR3O43731 214 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 IDH3BO43837 385 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 PF4V1P10720 104 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 G6PDP11413 515 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 GGT1P19440 569 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 SOX6P35712 828 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 C1QTNF12Q5T7M4 302 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 GALNT7Q86SF2 657 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 SNX29P2Q8IUI4 249 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 OR8J3Q8NGG0 315 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 OR13J1Q8NGT2 312 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 CDC26Q8NHZ8 85 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 CNIH3Q8TBE1 160 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 BRSK1Q8TDC3 778 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 BPIFB1Q8TDL5 484 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 MUL1Q969V5 352 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 ZNF419Q96HQ0 510 aaPredicted RBP6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 OR52E6Q96RD3 313 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 C2orf49Q9BVC5 232 aaPredicted RBP6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 EHD1Q9H4M9 534 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 SLAMF8Q9P0V8 285 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 ERVK-11Q9UQG0 969 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 LOC100506127A0A0U1RQW1 187 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 TCRBV5S2A0A599 114 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 A6NJY4 79 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 NEDD8-MDP1E9PL57 170 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 NRG2O14511 850 aaPredicted RBP6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 AREL1O15033 823 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 GJB3O75712 270 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 LATS1O95835 1130 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 GUCA1CO95843 209 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 OLFM2O95897 454 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 NTRK1P04629 796 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 INHBBP09529 407 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 CD36P16671 472 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 MAGP20916 626 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 IL12AP29459 219 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 CSRP3P50461 194 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 STC1P52823 247 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 MVKQ03426 396 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 FAM174BQ3ZCQ3 159 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 AGAP7PQ5VUJ5 663 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 KDELC1Q6UW63 502 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 HTR3DQ70Z44 454 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 KBTBD8Q8NFY9 601 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 SKA2Q8WVK7 121 aaPredicted RBP6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 CDK15Q96Q40 435 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 LINC00597Q9H2U6 94 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 EVA1BQ9NVM1 165 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 KLQ9UEF7 1012 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 WNT6Q9Y6F9 365 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 H0Y858 1186 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 FFAR3O14843 346 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 GPR42O15529 346 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 CACNG3O60359 315 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 CCNKO75909 580 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 PEX11BO96011 259 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 SERPINA1P01009 418 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 TP53P04637 393 aaPredicted RBP6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 PKMP14618 531 aaKnown RBP6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 HRH2P25021 359 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 HOXD9P28356 352 aaPredicted RBP6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 S100A3P33764 101 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 TTPAP49638 278 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 AGTR2P50052 363 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 CSTF3Q12996 717 aaKnown RBP6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 DMC1Q14565 340 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 PTPRCAPQ14761 206 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 RAB30Q15771 203 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 KCNJ8Q15842 424 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 SLC14A2Q15849 920 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 COL13A1Q5TAT6 717 aaPredicted RBP6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 FAM219BQ5XKK7 198 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 ENPP6Q6UWR7 440 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 AHSA2Q719I0 299 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 HEATR4Q86WZ0 1026 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 TMEM25Q86YD3 366 aa6.8□□□□□ -1.32
SRGAP3-213ENST00000618999 CADM3Q8N126 398 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms