RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 IKBKGQ9Y6K9 419 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 ZNF469Q96JG9 3925 aaPredicted RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 HSPB2A8KAH6 182 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 KLRC4-KLRK1H3BQV0 150 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 SUSD5O60279 629 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 CRTAMO95727 393 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 C8orf89P0DMQ9 161 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 GABRA1P14867 456 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 HRH2P25021 359 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 TPP2P29144 1249 aaPredicted RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 HSD17B2P37059 387 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 GRIA3P42263 894 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 ZFP36L2P47974 494 aaKnown RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 GEMP55040 296 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 WNT3AP56704 352 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 MLF1P58340 268 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 PMP22Q01453 160 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 ZNF33BQ06732 778 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 ARHGAP19Q14CB8 494 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 HSPB2Q16082 182 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 CMPK2Q5EBM0 449 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 PODNL1Q6PEZ8 512 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 MILR1Q7Z6M3 343 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 ANKRD37Q7Z713 158 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 TRIM73Q86UV7 250 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 CD163Q86VB7 1156 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 ZNF227Q86WZ6 799 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 GDAP1Q8TB36 358 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 GSX2Q9BZM3 304 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 DMRT3Q9NQL9 472 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 NLE1Q9NVX2 485 aaPredicted RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 UVRAGQ9P2Y5 699 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 SHOC2Q9UQ13 582 aa4.32□□□□□ -1.72
SNCA-213ENST00000618500 CFAP20Q9Y6A4 193 aaKnown RBP4.32□□□□□ -1.72
SNCA-213ENST00000618500 ANK3Q12955 4377 aaKnown RBP4.31□□□□□ -1.72
SNCA-213ENST00000618500 KCNE1BA0A087WTH5 132 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 PROSCO94903 275 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 MED26O95402 600 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 NSA2O95478 260 aaKnown RBP4.31□□□□□ -1.72
SNCA-213ENST00000618500 FTLP02792 175 aaPredicted RBP4.31□□□□□ -1.72
SNCA-213ENST00000618500 HSP90AA1P07900 732 aaKnown RBP4.31□□□□□ -1.72
SNCA-213ENST00000618500 GLI4P10075 376 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 PBLDP30039 288 aaPredicted RBP4.31□□□□□ -1.72
SNCA-213ENST00000618500 CD68P34810 354 aaPredicted RBP4.31□□□□□ -1.72
SNCA-213ENST00000618500 PTGER1P34995 402 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 TAS2R50P59544 299 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 GBE1Q04446 702 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 DEFB110Q30KQ9 67 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 EMC4Q5J8M3 183 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 C1orf185Q5T7R7 199 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 NDUFAF5Q5TEU4 345 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 KCTD11Q693B1 232 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 MAATS1Q7Z4T9 603 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 TMEM151BQ8IW70 566 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 RAB42Q8N4Z0 105 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 SIRT6Q8N6T7 355 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 LINC01555Q8NAE3 123 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 FBXO15Q8NCQ5 510 aaPredicted RBP4.31□□□□□ -1.72
SNCA-213ENST00000618500 C7orf57Q8NEG2 295 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 OR5AR1Q8NGP9 310 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.31□□□□□ -1.72
SNCA-213ENST00000618500 PEX13Q92968 403 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 QKIQ96PU8 341 aaKnown RBP eCLIP4.31□□□□□ -1.72
SNCA-213ENST00000618500 EBNA1BP2Q99848 306 aaKnown RBP4.31□□□□□ -1.72
SNCA-213ENST00000618500 ZFYVE21Q9BQ24 234 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 SLC6A16Q9GZN6 736 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 GBA3Q9H227 469 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 QPCTLQ9NXS2 382 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 UTP6Q9NYH9 597 aaKnown RBP4.31□□□□□ -1.72
SNCA-213ENST00000618500 NKX2-6A6NCS4 301 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 FIGNL2A6NMB9 653 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 MAGEB17A8MXT2 336 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 NPIPA5E9PKD4 350 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 FCHO1O14526 889 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 APOL1O14791 398 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 STX7O15400 261 aaKnown RBP4.31□□□□□ -1.72
SNCA-213ENST00000618500 GPC4O75487 556 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 ANXA9O76027 345 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 IFNA2P01563 188 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 ANXA5P08758 320 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 TCF4P15884 667 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 UGT1A6P19224 532 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 KDELR1P24390 212 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 ARHGAP25P42331 645 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 ABATP80404 500 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 WASHC5Q12768 1159 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 GBX1Q14549 363 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 USP10Q14694 798 aaKnown RBP4.31□□□□□ -1.72
SNCA-213ENST00000618500 CEBPEQ15744 281 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 NDUFA9Q16795 377 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 WASHC2DQ5SRD0 308 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 ISM2Q6H9L7 571 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 ZNF425Q6IV72 752 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 RANBP10Q6VN20 620 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 APTXQ7Z2E3 356 aaKnown RBP4.31□□□□□ -1.72
SNCA-213ENST00000618500 PHC2Q8IXK0 858 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 FBXW8Q8N3Y1 598 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 WFDC11Q8NEX6 87 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 PIGTQ969N2 578 aa4.31□□□□□ -1.72
SNCA-213ENST00000618500 ISL2Q96A47 359 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms