RNA–Protein interactions for RNA: ENST00000618081.4

CCDC144B-208, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

TSL 1 (best) BASIC

Gene CCDC144B, Length 8,688 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-208ENST00000618081 OSTF1Q92882 214 aa10.91□□□□□ -0.66
CCDC144B-208ENST00000618081 FKBPLQ9UIM3 349 aa10.91□□□□□ -0.66
CCDC144B-208ENST00000618081 PCDHGA2Q9Y5H1 932 aa10.91□□□□□ -0.66
CCDC144B-208ENST00000618081 ADGRB1O14514 1584 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 A0A0G2JLL6 359 aaPredicted RBP10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 M0R129 80 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 GABRDO14764 452 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 PDYNP01213 254 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 CLRN1P58418 232 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 ERVK-8P63133 956 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 NOXRED1Q6NXP6 359 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 PRRT2Q7Z6L0 340 aaPredicted RBP10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 ZNF709Q8N972 641 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 SPERTQ8NA61 448 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 NCSTNQ92542 709 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 SIPA1Q96FS4 1042 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 NMUR2Q9GZQ4 415 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 USP29Q9HBJ7 922 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 PADI2Q9Y2J8 665 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 A0A1W2PRU2 124 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 ENTPD6O75354 484 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 SLBPQ14493 270 aaKnown RBP eCLIP10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 WDR45BQ5MNZ6 344 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 SPAG16Q8N0X2 631 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 RBM15BQ8NDT2 890 aaKnown RBP10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 TRPV4Q9HBA0 871 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 Q9N2J8 555 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 TLR9Q9NR96 1032 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 SNAPC5O75971 98 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 GP1BBP13224 206 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 ACP5P13686 325 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 ECM1Q16610 540 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 ADGRF1Q5T601 910 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 ZNF554Q86TJ5 538 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 CMTR2Q8IYT2 770 aaKnown RBP10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 RAB2BQ8WUD1 216 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 CD180Q99467 661 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 TRIM36Q9NQ86 728 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 NEURL4Q96JN8 1562 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 ZNF670-ZNF695F2Z2N8 137 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 TGFB1I1O43294 461 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 SYNGR4O95473 234 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 MAPK3P27361 379 aaPredicted RBP10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 CLEC12AQ5QGZ9 265 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 LPCAT4Q643R3 524 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 CNKSR3Q6P9H4 555 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 TMEM126BQ8IUX1 230 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 ZNF781Q8N8C0 355 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 CYB5D2Q8WUJ1 264 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 MFSD3Q96ES6 412 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 EFCAB11Q9BUY7 163 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 TFB2MQ9H5Q4 396 aaKnown RBP10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 MLXQ9UH92 298 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 ALG5Q9Y673 324 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 CACNA1SQ13698 1873 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 DUOX1Q9NRD9 1551 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 SCGB1D2O95969 90 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 JMJD7P0C870 316 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 EDNRAP25101 427 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 RFC2P35250 354 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 GDF6Q6KF10 455 aaPredicted RBP10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 TAC4Q86UU9 113 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 MND1Q9BWT6 205 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 CENPMQ9NSP4 180 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 GRHL1Q9NZI5 618 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 CACNA1CQ13936 2221 aa10.9□□□□□ -0.66
CCDC144B-208ENST00000618081 C2orf71A6NGG8 1288 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 A8MU76 341 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 USP2O75604 605 aaPredicted RBP10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 CSN2P05814 226 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 SMPD1P17405 629 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 MAGEA12P43365 314 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 TIGD6Q17RP2 521 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 OR5M3Q8NGP4 307 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 SDCBP2Q9H190 292 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 TVP23BQ9NYZ1 205 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 LAMP5Q9UJQ1 280 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 MYOM1P52179 1685 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 PEPDP12955 493 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 NELFEP18615 380 aaKnown RBP10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 SLC6A4P31645 630 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 OR12D2P58182 307 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 DSTNP60981 165 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 ADAM15Q13444 863 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 GANABQ14697 944 aaKnown RBP10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 RALGPS1Q5JS13 557 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 ZDHHC12Q96GR4 267 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 HBEGFQ99075 208 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 POLR2J2Q9GZM3 115 aaKnown RBP10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 DKK3Q9UBP4 350 aa10.9□□□□□ -0.67
CCDC144B-208ENST00000618081 FOSL2P15408 326 aa10.89□□□□□ -0.67
CCDC144B-208ENST00000618081 CERS5Q8N5B7 392 aa10.89□□□□□ -0.67
CCDC144B-208ENST00000618081 LRRN4CLQ8ND94 238 aa10.89□□□□□ -0.67
CCDC144B-208ENST00000618081 ARL8BQ9NVJ2 186 aa10.89□□□□□ -0.67
CCDC144B-208ENST00000618081 TRNAU1APQ9NX07 287 aaKnown RBP10.89□□□□□ -0.67
CCDC144B-208ENST00000618081 EIF3KQ9UBQ5 218 aaKnown RBP10.89□□□□□ -0.67
CCDC144B-208ENST00000618081 ZNF69Q9UC07 566 aa10.89□□□□□ -0.67
CCDC144B-208ENST00000618081 ATP1B2P14415 290 aaPredicted RBP10.89□□□□□ -0.67
CCDC144B-208ENST00000618081 DAOAP59103 153 aa10.89□□□□□ -0.67
CCDC144B-208ENST00000618081 PRSS55Q6UWB4 352 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms