RNA–Protein interactions for RNA: ENST00000616053.4

TCF4-248, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 8,140 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-248ENST00000616053 PDE7AQ13946 482 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 GPR157Q5UAW9 335 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 TMPRSS6Q8IU80 811 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 OR9A4Q8NGU2 314 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 BSCL2Q96G97 398 aaPredicted RBP12.34□□□□□ -0.43
TCF4-248ENST00000616053 ZNF514Q96K75 400 aaPredicted RBP12.34□□□□□ -0.43
TCF4-248ENST00000616053 SNX27Q96L92 541 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 LENG8Q96PV6 779 aaPredicted RBP12.34□□□□□ -0.43
TCF4-248ENST00000616053 SPATA31A1Q5TZJ5 1347 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 H7C1Q1 480 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 PLK4O00444 970 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 INPPL1O15357 1258 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 CBLP22681 906 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 GLDCP23378 1020 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 CLCNKAP51800 687 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 HES1Q14469 280 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 SGMS1Q86VZ5 419 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 ELP5Q8TE02 316 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 RRNAD1Q96FB5 475 aaKnown RBP12.34□□□□□ -0.43
TCF4-248ENST00000616053 HSFY1Q96LI6 401 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 CDC42EP4Q9H3Q1 356 aaKnown RBP12.34□□□□□ -0.43
TCF4-248ENST00000616053 NANSQ9NR45 359 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 IFNA1P01562 189 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 FABP3P05413 133 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 OR4Q2P0C623 313 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 YAP1P46937 504 aaKnown RBP12.34□□□□□ -0.43
TCF4-248ENST00000616053 GNB2P62879 340 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 OR52E4Q8NGH9 312 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 GLYATL2Q8WU03 294 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 UFD1Q92890 307 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 GPR174Q9BXC1 333 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 NDUFAF4Q9P032 175 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 TNS3Q68CZ2 1445 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 BICRAQ9NZM4 1560 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 SLC37A4O43826 429 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 IGFBP1P08833 259 aaPredicted RBP12.34□□□□□ -0.43
TCF4-248ENST00000616053 SYT16Q17RD7 645 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 RAB12Q6IQ22 244 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 TMED4Q7Z7H5 227 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 TCP10LQ8TDR4 215 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 MYRFLQ96LU7 910 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 TAS2R7Q9NYW3 318 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 PCYOX1Q9UHG3 505 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 NOP16Q9Y3C1 178 aaKnown RBP12.34□□□□□ -0.43
TCF4-248ENST00000616053 CAPN8A6NHC0 703 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 PROCP04070 461 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 PAX6P26367 422 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 GRIA2P42262 883 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 FXYD6P3P58550 94 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 DEFA5Q01523 94 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 MXD1Q05195 221 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 CHIT1Q13231 466 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 LRRTM4Q86VH4 590 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 SLITRK4Q8IW52 837 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 CYB5D2Q8WUJ1 264 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 TMCO6Q96DC7 493 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 MIPEPQ99797 713 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 ZNF451Q9Y4E5 1061 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 EFCAB6Q5THR3 1501 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 ERI3O43414 337 aaKnown RBP12.34□□□□□ -0.43
TCF4-248ENST00000616053 GJB6O95452 261 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 PRPH2P23942 346 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 PMS2P3Q13401 168 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 HABP2Q14520 560 aaPredicted RBP12.34□□□□□ -0.43
TCF4-248ENST00000616053 NECTIN1Q15223 517 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 DLG2Q15700 870 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 FAM183BPQ6ZVS7 135 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 USP30Q70CQ3 517 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 YTHDF3Q7Z739 585 aaKnown RBP12.34□□□□□ -0.43
TCF4-248ENST00000616053 PGAM5Q96HS1 289 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 LPIN3Q9BQK8 851 aa12.34□□□□□ -0.43
TCF4-248ENST00000616053 ITGB5P18084 799 aa12.33□□□□□ -0.43
TCF4-248ENST00000616053 ACSM3Q53FZ2 586 aa12.33□□□□□ -0.43
TCF4-248ENST00000616053 SYN2Q92777 582 aaPredicted RBP12.33□□□□□ -0.43
TCF4-248ENST00000616053 RGMAQ96B86 450 aa12.33□□□□□ -0.43
TCF4-248ENST00000616053 OXNAD1Q96HP4 312 aaPredicted RBP12.33□□□□□ -0.43
TCF4-248ENST00000616053 OR51B6Q9H340 312 aa12.33□□□□□ -0.43
TCF4-248ENST00000616053 ATP7BP35670 1465 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 A0A1B0GVT2 93 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 CHRNA1P02708 482 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 TFPTP0C1Z6 253 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 HK1P19367 917 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 CSNK2A2P19784 350 aaPredicted RBP12.33□□□□□ -0.44
TCF4-248ENST00000616053 DLSTP36957 453 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 MAGEA6P43360 314 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 CTBP1Q13363 440 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 VMACQ2NL98 169 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 CHTF18Q8WVB6 975 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 FOXJ1Q92949 421 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 MKL1Q969V6 931 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 PIWIL1Q96J94 861 aaKnown RBP12.33□□□□□ -0.44
TCF4-248ENST00000616053 CSPG4P5Q96PW8 444 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 PLEKHG4BQ96PX9 1271 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 RLIMQ9NVW2 624 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 NARSO43776 548 aaKnown RBP12.33□□□□□ -0.44
TCF4-248ENST00000616053 NPHS1O60500 1241 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 STRADAQ7RTN6 431 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 OR4N5Q8IXE1 308 aa12.33□□□□□ -0.44
TCF4-248ENST00000616053 DAZAP1Q96EP5 407 aaKnown RBP12.33□□□□□ -0.44
TCF4-248ENST00000616053 ISCA1Q9BUE6 129 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms