RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 BMP1P13497 986 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 ST3GAL4Q11206 333 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 ARMC12Q5T9G4 340 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 MSANTD2Q6P1R3 559 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 FAM151BQ6UXP7 276 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 DPP10Q8N608 796 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 OR6F1Q8NGZ6 308 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 IL4I1Q96RQ9 567 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 CIPCQ9C0C6 399 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 FAM124BQ9H5Z6 455 aaPredicted RBP12.8□□□□□ -0.36
MSH6-214ENST00000616033 DUSP12Q9UNI6 340 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 C2orf81A6NN90 581 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 RRM2P31350 389 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 SOX6P35712 828 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 IRF3Q14653 427 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 RFX4Q33E94 735 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 MS4A13Q5J8X5 152 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 RAB41Q5JT25 222 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 GLCCI1Q86VQ1 547 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 TMEM132CQ8N3T6 1108 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 OR8J3Q8NGG0 315 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 HCAR2Q8TDS4 363 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 SELENOMQ8WWX9 145 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 MUTYHQ9UIF7 546 aa12.8□□□□□ -0.36
MSH6-214ENST00000616033 SLC16A6O15403 523 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 FFAR2O15552 330 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 B3GALNT1O75752 331 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 EPN2O95208 641 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 SNX4O95219 450 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 HTR3AP46098 478 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 PUS10Q3MIT2 529 aaKnown RBP12.79□□□□□ -0.36
MSH6-214ENST00000616033 PRSS48Q7RTY5 328 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 ZNF605Q86T29 641 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 RAB43Q86YS6 212 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 GPR151Q8TDV0 419 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 BOCQ9BWV1 1114 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 OR2B2Q9GZK3 357 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 NARFLQ9H6Q4 476 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 ARNT2Q9HBZ2 717 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 RHCGQ9UBD6 479 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 GFRA2O00451 464 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 WISP3O95389 354 aaPredicted RBP12.79□□□□□ -0.36
MSH6-214ENST00000616033 PTTG1O95997 202 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 BCKDHAP12694 445 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 HOXA9P31269 272 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 PIK3CBP42338 1070 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 CYP4F8P98187 520 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 ZNF267Q14586 743 aaPredicted RBP12.79□□□□□ -0.36
MSH6-214ENST00000616033 USP39Q53GS9 565 aaKnown RBP12.79□□□□□ -0.36
MSH6-214ENST00000616033 C16orf59Q7L2K0 433 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 CCDC28AQ8IWP9 274 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 TTC9BQ8N6N2 239 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 KLHDC9Q8NEP7 349 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 CD200R1Q8TD46 325 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 PPP3R2Q96LZ3 170 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 PRG3Q9Y2Y8 225 aaPredicted RBP12.79□□□□□ -0.36
MSH6-214ENST00000616033 ISPDA4D126 451 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 EIF2S1P05198 315 aaKnown RBP12.79□□□□□ -0.36
MSH6-214ENST00000616033 KCNE1P15382 129 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 POLR2EP19388 210 aaKnown RBP12.79□□□□□ -0.36
MSH6-214ENST00000616033 ENPP1P22413 925 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 ARHGEF6Q15052 776 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 PNCKQ6P2M8 343 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 CLECL1Q8IZS7 167 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 GLB1L3Q8NCI6 653 aaPredicted RBP12.79□□□□□ -0.36
MSH6-214ENST00000616033 FEVQ99581 238 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 SMAD5Q99717 465 aaKnown RBP12.79□□□□□ -0.36
MSH6-214ENST00000616033 RLIMQ9NVW2 624 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 RAPGEFL1Q9UHV5 662 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 KCNH4Q9UQ05 1017 aa12.79□□□□□ -0.36
MSH6-214ENST00000616033 FAM172BPA6NC97 362 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 PRR23AA6NEV1 266 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 CELF2O95319 508 aaKnown RBP12.78□□□□□ -0.36
MSH6-214ENST00000616033 OTCP00480 354 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 PRLP01236 227 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 FGF1P05230 155 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 ENGP17813 658 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 SOX3P41225 446 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 GANABQ14697 944 aaKnown RBP12.78□□□□□ -0.36
MSH6-214ENST00000616033 BRMS1LQ5PSV4 323 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 LRRC66Q68CR7 880 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 SHQ1Q6PI26 577 aaKnown RBP12.78□□□□□ -0.36
MSH6-214ENST00000616033 WDR36Q8NI36 951 aaKnown RBP12.78□□□□□ -0.36
MSH6-214ENST00000616033 ZNF382Q96SR6 550 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 CINPQ9BW66 212 aaPredicted RBP12.78□□□□□ -0.36
MSH6-214ENST00000616033 B3GNT4Q9C0J1 378 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 RRAGCQ9HB90 399 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 TMEM39AQ9NV64 488 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 NEUROG3Q9Y4Z2 214 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 ARL5CA6NH57 179 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 ATP6V1G2-DDX39BF2Z307 99 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 AREL1O15033 823 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 ANKRD28O15084 1053 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 TNFRSF21O75509 655 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 APOL3O95236 402 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 TNFSF8P32971 234 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 FEN1P39748 380 aaKnown RBP12.78□□□□□ -0.36
MSH6-214ENST00000616033 CDH12P55289 794 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 GALK2Q01415 458 aa12.78□□□□□ -0.36
MSH6-214ENST00000616033 ELP6Q0PNE2 266 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms