RNA–Protein interactions for RNA: ENST00000615798.4

COL12A1-211, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL12A1, Length 11,579 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-211ENST00000615798 SLC22A3O75751 556 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 MT-CO1P00395 513 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 TACSTD2P09758 323 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 GNRHRP30968 328 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 CDK18Q07002 472 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 GCNT6Q5T4J0 391 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 TSEN2Q8NCE0 465 aaKnown RBP9.07□□□□□ -0.96
COL12A1-211ENST00000615798 OR1J4Q8NGS1 313 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 FAIMQ9NVQ4 179 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 KCMF1Q9P0J7 381 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 GTPBP1O00178 669 aaKnown RBP9.07□□□□□ -0.96
COL12A1-211ENST00000615798 ATMINO43313 823 aaPredicted RBP9.07□□□□□ -0.96
COL12A1-211ENST00000615798 AVILO75366 819 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 DGKGP49619 791 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 RHBDL3P58872 404 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 FAM58AQ8N1B3 248 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 PRELID2Q8N945 189 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 SMG8Q8ND04 991 aaKnown RBP9.07□□□□□ -0.96
COL12A1-211ENST00000615798 FAM49AQ9H0Q0 323 aaPredicted RBP9.07□□□□□ -0.96
COL12A1-211ENST00000615798 PLEKHA3Q9HB20 300 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 ZNF510Q9Y2H8 683 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 PTTG1O95997 202 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 SFTPBP07988 381 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 UBBP0CG47 229 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 UBCP0CG48 685 aaKnown RBP9.07□□□□□ -0.96
COL12A1-211ENST00000615798 ACO1P21399 889 aaKnown RBP9.07□□□□□ -0.96
COL12A1-211ENST00000615798 RPS27AP62979 156 aaKnown RBP9.07□□□□□ -0.96
COL12A1-211ENST00000615798 UBA52P62987 128 aaKnown RBP9.07□□□□□ -0.96
COL12A1-211ENST00000615798 CYP1B1Q16678 543 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 KANK2Q63ZY3 851 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 SLC7A5P1Q8MH63 180 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 OR5B17Q8NGF7 314 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 SMARCD2Q92925 531 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 HSFY1Q96LI6 401 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 SLITRK1Q96PX8 696 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 HSD3B7Q9H2F3 369 aa9.07□□□□□ -0.96
COL12A1-211ENST00000615798 PIN4Q9Y237 131 aaKnown RBP9.07□□□□□ -0.96
COL12A1-211ENST00000615798 FGF10O15520 208 aaPredicted RBP9.06□□□□□ -0.96
COL12A1-211ENST00000615798 HMBSP08397 361 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 RPL7P18124 248 aaKnown RBP9.06□□□□□ -0.96
COL12A1-211ENST00000615798 PEX2P28328 305 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 ETV3P41162 512 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 MAP3K8P41279 467 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 GLP1RP43220 463 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 RABL3Q5HYI8 236 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 C10orf90Q96M02 699 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 CDH22Q9UJ99 828 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 DERAQ9Y315 318 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 CAMTA1Q9Y6Y1 1673 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 IMPDH1P20839 514 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 MAP2K3P46734 347 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 VSX2P58304 361 aaPredicted RBP9.06□□□□□ -0.96
COL12A1-211ENST00000615798 BNIP3Q12983 259 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 C16orf46Q6P387 395 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 ANKRD13BQ86YJ7 626 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 CORO1BQ9BR76 489 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 TMEM121BQ9BXQ6 578 aaPredicted RBP9.06□□□□□ -0.96
COL12A1-211ENST00000615798 PLCXD1Q9NUJ7 323 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 ARL8BQ9NVJ2 186 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 OPTCQ9UBM4 332 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 COQ9O75208 318 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 SRPRAP08240 638 aaKnown RBP9.06□□□□□ -0.96
COL12A1-211ENST00000615798 BDKRB2P30411 391 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 HK3P52790 923 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 ART1P52961 327 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 HSF1Q00613 529 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 FAAP100Q0VG06 881 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 MAMLD1Q13495 774 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 RSU1Q15404 277 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 MPPE1Q53F39 396 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 MFSD14CQ5VZR4 134 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 LRRN4CLQ8ND94 238 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 STRA6Q9BX79 667 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 FAM53CQ9NYF3 392 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 EGFL7Q9UHF1 273 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 UBIAD1Q9Y5Z9 338 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 RPS10-NUDT3A0A1W2PQS6 291 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 ZNF878C9JN71 531 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 RPS10P46783 165 aaKnown RBP9.06□□□□□ -0.96
COL12A1-211ENST00000615798 FXNQ16595 210 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 ZACNQ401N2 412 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 TATDN1Q6P1N9 297 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 C12orf40Q86WS4 652 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 RELL2Q8NC24 303 aaPredicted RBP9.06□□□□□ -0.96
COL12A1-211ENST00000615798 TMEM185AQ8NFB2 350 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 HTR3CQ8WXA8 447 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 IRGQQ8WZA9 623 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 OR2M2Q96R28 347 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 SYT15Q9BQS2 421 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 CXXC1Q9P0U4 656 aaPredicted RBP9.06□□□□□ -0.96
COL12A1-211ENST00000615798 TP53BP1Q12888 1972 aaPredicted RBP9.06□□□□□ -0.96
COL12A1-211ENST00000615798 MDC1Q14676 2089 aaKnown RBP9.06□□□□□ -0.96
COL12A1-211ENST00000615798 C5orf60A6NFR6 353 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 CPN2P22792 545 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 CYP2A13Q16696 494 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 DCAF6Q58WW2 860 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 ZNF551Q7Z340 670 aaPredicted RBP9.06□□□□□ -0.96
COL12A1-211ENST00000615798 SLC51BQ86UW2 128 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 TMEM86AQ8N2M4 240 aa9.06□□□□□ -0.96
COL12A1-211ENST00000615798 TMEM199Q8N511 208 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms