RNA–Protein interactions for RNA: ENST00000615393.5

VEGFA-227, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 984 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-227ENST00000615393 EMP3P54852 163 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 MLLT10P55197 1068 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 ARF3P61204 181 aaPredicted RBP24.07■■□□□ 1.44
VEGFA-227ENST00000615393 NADK2Q4G0N4 442 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 VWA5B1Q5TIE3 1220 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 ZNF425Q6IV72 752 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 HIBCHQ6NVY1 386 aaPredicted RBP24.07■■□□□ 1.44
VEGFA-227ENST00000615393 IGDCC3Q8IVU1 814 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 SPNS2Q8IVW8 549 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 GALNT16Q8N428 558 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 MCOLN3Q8TDD5 553 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 MIB2Q96AX9 1013 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 LRRC39Q96DD0 335 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 CFAP36Q96G28 342 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 CABS1Q96KC9 395 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 SPSB2Q99619 263 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 ABCF3Q9NUQ8 709 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 C5AR2Q9P296 337 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 RNF14Q9UBS8 474 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 PYCARDQ9ULZ3 195 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 CHMP2BQ9UQN3 213 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 PLAAQ9Y263 795 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 MAU2Q9Y6X3 613 aa24.07■■□□□ 1.44
VEGFA-227ENST00000615393 AHSGP02765 367 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 C8GP07360 202 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 GABRB3P28472 473 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 IMPA1P29218 277 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 ELK3P41970 407 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 RELAQ04206 551 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 RAPSNQ13702 412 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 HIF1AQ16665 826 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 PRTGQ2VWP7 1150 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 ADCK2Q7Z695 626 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 ATCAYQ86WG3 371 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 MYO1HQ8N1T3 1032 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 CSNK1A1LQ8N752 337 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 EEF1AKMT1Q8WVE0 214 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 RERGQ96A58 199 aaPredicted RBP24.06■■□□□ 1.44
VEGFA-227ENST00000615393 COL26A1Q96A83 441 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 VPS50Q96JG6 964 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 CCDC138Q96M89 665 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 TRIM51Q9BSJ1 452 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 SOX17Q9H6I2 414 aaPredicted RBP24.06■■□□□ 1.44
VEGFA-227ENST00000615393 ATP13A2Q9NQ11 1180 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 CTSFQ9UBX1 484 aa24.06■■□□□ 1.44
VEGFA-227ENST00000615393 SPENQ96T58 3664 aaKnown RBP24.06■■□□□ 1.44
VEGFA-227ENST00000615393 TNRC6AQ8NDV7 1962 aaKnown RBP24.05■■□□□ 1.44
VEGFA-227ENST00000615393 TTI1O43156 1089 aa24.05■■□□□ 1.44
VEGFA-227ENST00000615393 ALPPP05187 535 aa24.05■■□□□ 1.44
VEGFA-227ENST00000615393 ARL4CP56559 192 aa24.05■■□□□ 1.44
VEGFA-227ENST00000615393 TIAL1Q01085 375 aaKnown RBP eCLIP24.05■■□□□ 1.44
VEGFA-227ENST00000615393 OCA2Q04671 838 aa24.05■■□□□ 1.44
VEGFA-227ENST00000615393 SP140Q13342 867 aa24.05■■□□□ 1.44
VEGFA-227ENST00000615393 MYBPC3Q14896 1274 aa24.05■■□□□ 1.44
VEGFA-227ENST00000615393 HP1BP3Q5SSJ5 553 aaPredicted RBP24.05■■□□□ 1.44
VEGFA-227ENST00000615393 RBM20Q5T481 1227 aaKnown RBP24.05■■□□□ 1.44
VEGFA-227ENST00000615393 LRRC56Q8IYG6 542 aaPredicted RBP24.05■■□□□ 1.44
VEGFA-227ENST00000615393 EFCAB3Q8N7B9 438 aa24.05■■□□□ 1.44
VEGFA-227ENST00000615393 SNF8Q96H20 258 aa24.05■■□□□ 1.44
VEGFA-227ENST00000615393 C10orf90Q96M02 699 aa24.05■■□□□ 1.44
VEGFA-227ENST00000615393 CCDC177Q9NQR7 707 aaPredicted RBP24.05■■□□□ 1.44
VEGFA-227ENST00000615393 SEMA3GQ9NS98 782 aa24.05■■□□□ 1.44
VEGFA-227ENST00000615393 CORO1CQ9ULV4 474 aaPredicted RBP24.05■■□□□ 1.44
VEGFA-227ENST00000615393 CDC14AQ9UNH5 594 aa24.05■■□□□ 1.44
VEGFA-227ENST00000615393 VSTM2BA6NLU5 285 aa24.04■■□□□ 1.44
VEGFA-227ENST00000615393 TXNDC9O14530 226 aa24.04■■□□□ 1.44
VEGFA-227ENST00000615393 SLC16A5O15375 505 aa24.04■■□□□ 1.44
VEGFA-227ENST00000615393 PRPF4O43172 522 aaKnown RBP eCLIP24.04■■□□□ 1.445e-8■■■□□ 16
VEGFA-227ENST00000615393 SEC31AO94979 1220 aaKnown RBP24.04■■□□□ 1.44
VEGFA-227ENST00000615393 MED26O95402 600 aa24.04■■□□□ 1.44
VEGFA-227ENST00000615393 CD97P48960 835 aa24.04■■□□□ 1.44
VEGFA-227ENST00000615393 ITGA8P53708 1063 aa24.04■■□□□ 1.44
VEGFA-227ENST00000615393 CDKN2DP55273 166 aa24.04■■□□□ 1.44
VEGFA-227ENST00000615393 AIMP2Q13155 320 aaKnown RBP24.04■■□□□ 1.44
VEGFA-227ENST00000615393 TEDDM1Q5T9Z0 273 aa24.04■■□□□ 1.44
VEGFA-227ENST00000615393 PAQR3Q6TCH7 311 aa24.04■■□□□ 1.44
VEGFA-227ENST00000615393 SHISA6Q6ZSJ9 500 aa24.04■■□□□ 1.44
VEGFA-227ENST00000615393 TMEM151BQ8IW70 566 aa24.04■■□□□ 1.44
VEGFA-227ENST00000615393 DTWD1Q8N5C7 304 aa24.04■■□□□ 1.44
VEGFA-227ENST00000615393 MVB12AQ96EY5 273 aa24.04■■□□□ 1.44
VEGFA-227ENST00000615393 PCBD2Q9H0N5 130 aa24.04■■□□□ 1.44
VEGFA-227ENST00000615393 PARVBQ9HBI1 364 aa24.04■■□□□ 1.44
VEGFA-227ENST00000615393 STOX2Q9P2F5 926 aaPredicted RBP24.04■■□□□ 1.44
VEGFA-227ENST00000615393 ZNF282Q9UDV7 671 aaPredicted RBP24.04■■□□□ 1.44
VEGFA-227ENST00000615393 TEX264Q9Y6I9 313 aa24.04■■□□□ 1.44
VEGFA-227ENST00000615393 MED13Q9UHV7 2174 aa24.03■■□□□ 1.44
VEGFA-227ENST00000615393 NDC80O14777 642 aa24.03■■□□□ 1.44
VEGFA-227ENST00000615393 IPO13O94829 963 aaKnown RBP24.03■■□□□ 1.44
VEGFA-227ENST00000615393 FBLP22087 321 aaKnown RBP24.03■■□□□ 1.44
VEGFA-227ENST00000615393 HRH2P25021 359 aa24.03■■□□□ 1.44
VEGFA-227ENST00000615393 SOX8P57073 446 aa24.03■■□□□ 1.44
VEGFA-227ENST00000615393 PDAP1Q13442 181 aaKnown RBP24.03■■□□□ 1.44
VEGFA-227ENST00000615393 RBBP7Q16576 425 aa24.03■■□□□ 1.44
VEGFA-227ENST00000615393 GARNL3Q5VVW2 1013 aa24.03■■□□□ 1.44
VEGFA-227ENST00000615393 STEAP4Q687X5 459 aa24.03■■□□□ 1.44
VEGFA-227ENST00000615393 JMJD6Q6NYC1 403 aaPredicted RBP24.03■■□□□ 1.44
VEGFA-227ENST00000615393 CPT1CQ8TCG5 803 aa24.03■■□□□ 1.44
VEGFA-227ENST00000615393 MIEF2Q96C03 454 aa24.03■■□□□ 1.44
VEGFA-227ENST00000615393 LINGO1Q96FE5 620 aa24.03■■□□□ 1.44
VEGFA-227ENST00000615393 PWWP2AQ96N64 755 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms