RNA–Protein interactions for RNA: ENST00000615216.4

CHD9-221, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 10,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-221ENST00000615216 TLR1Q15399 786 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ASTE1Q2TB18 679 aaPredicted RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 SLC25A25Q6KCM7 469 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ZNF782Q6ZMW2 699 aaPredicted RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 SPATA31D4Q6ZUB0 917 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ZNF615Q8N8J6 731 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 SETD6Q8TBK2 473 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ZCCHC10Q8TBK6 192 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 CITED4Q96RK1 184 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 GAL3ST4Q96RP7 486 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 GFM1Q96RP9 751 aaKnown RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 AKTIPQ9H8T0 292 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 APOBEC3GQ9HC16 384 aaKnown RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 C12orf4Q9NQ89 552 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 C14orf166Q9Y224 244 aaKnown RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 SNX10Q9Y5X0 201 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 TEX264Q9Y6I9 313 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 CDH10Q9Y6N8 788 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 NRXN3Q9Y4C0 1643 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 A0A1W2PQ45 241 aaPredicted RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 A0A1W2PQY0 241 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 H0YAE9 185 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 GNSP15586 552 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ENGP17813 658 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 PVALBP20472 110 aaPredicted RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 CD72P21854 359 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 EIF2S3P41091 472 aaKnown RBP4.46□□□□□ -1.7
CHD9-221ENST00000615216 SLC10A7Q0GE19 358 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 SLC10A6Q3KNW5 377 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 CRB2Q5IJ48 1285 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 GPR153Q6NV75 609 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 RPL13AP3Q6NVV1 102 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ZDHHC24Q6UX98 284 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 GID4Q8IVV7 300 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 GALNT15Q8N3T1 639 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 SLC35B2Q8TB61 432 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ZUFSPQ96AP4 578 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 KCNC2Q96PR1 638 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 CGREF1Q99674 301 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 GPR22Q99680 433 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ASPNQ9BXN1 380 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 DPAGT1Q9H3H5 408 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 SUV39H2Q9H5I1 410 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 SNTG1Q9NSN8 517 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 ABCB8Q9NUT2 735 aa4.46□□□□□ -1.7
CHD9-221ENST00000615216 TNFP01375 233 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 ADH5P11766 374 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 PGAM2P15259 253 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 STOMP27105 288 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 ACTR1BP42025 376 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 TSPAN5P62079 268 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 DSG2Q14126 1118 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 LRRTM4Q86VH4 590 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 LGI4Q8N135 537 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 FBXO15Q8NCQ5 510 aaPredicted RBP4.45□□□□□ -1.7
CHD9-221ENST00000615216 C2CD4AQ8NCU7 369 aaPredicted RBP4.45□□□□□ -1.7
CHD9-221ENST00000615216 SUN5Q8TC36 379 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 PEX13Q92968 403 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 TMEM80Q96HE8 168 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 SLC4A9Q96Q91 983 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 MTERF1Q99551 399 aaKnown RBP4.45□□□□□ -1.7
CHD9-221ENST00000615216 FANCFQ9NPI8 374 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 MTMR10Q9NXD2 777 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 TMEM59LQ9UK28 342 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 CMAHPQ9Y471 501 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 PKD1L3Q7Z443 1732 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 LOC100130705A0A1B0GUX0 176 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 ZNF726A6NNF4 738 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 MANBAO00462 879 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 FOXN2P32314 431 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 CCNHP51946 323 aaPredicted RBP4.45□□□□□ -1.7
CHD9-221ENST00000615216 CBFBQ13951 182 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 NPTX1Q15818 432 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 SPRYD7Q5W111 196 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 ZNF367Q7RTV3 350 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 SLC51AQ86UW1 340 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 ZC3HC1Q86WB0 502 aaKnown RBP4.45□□□□□ -1.7
CHD9-221ENST00000615216 CLIP4Q8N3C7 705 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 CMASQ8NFW8 434 aaPredicted RBP4.45□□□□□ -1.7
CHD9-221ENST00000615216 OR6K6Q8NGW6 343 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 TSPEARQ8WU66 669 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 PPP1R13LQ8WUF5 828 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 NEDD4LQ96PU5 975 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 POLR2J2Q9GZM3 115 aaKnown RBP4.45□□□□□ -1.7
CHD9-221ENST00000615216 ACTL8Q9H568 366 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 PCDHB16Q9NRJ7 776 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 TVP23BQ9NYZ1 205 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 NLGN3Q9NZ94 848 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 ZNF69Q9UC07 566 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 MYBPHLA2RUH7 354 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 LCHNA4D1U4 455 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 CLIC1O00299 241 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 NDUFS4O43181 175 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 CYP17A1P05093 508 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 YES1P07947 543 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 CXCR1P25024 350 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 SEC13P55735 322 aa4.45□□□□□ -1.7
CHD9-221ENST00000615216 MAZP56270 477 aaKnown RBP4.45□□□□□ -1.7
CHD9-221ENST00000615216 PUM1Q14671 1186 aaKnown RBP eCLIP4.45□□□□□ -1.75e-7■■□□□ 11.8
CHD9-221ENST00000615216 ZNF630Q2M218 657 aaPredicted RBP4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms