RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 EZRP15311 586 aaKnown RBP21.7■■□□□ 1.06
FAM228B-208ENST00000613899 VARSP26640 1264 aaKnown RBP21.7■■□□□ 1.06
FAM228B-208ENST00000613899 EMP3P54852 163 aa21.7■■□□□ 1.06
FAM228B-208ENST00000613899 YBX1P67809 324 aaKnown RBP21.7■■□□□ 1.06
FAM228B-208ENST00000613899 ABATP80404 500 aa21.7■■□□□ 1.06
FAM228B-208ENST00000613899 TAP2Q03519 686 aa21.7■■□□□ 1.06
FAM228B-208ENST00000613899 PRDX1Q06830 199 aaKnown RBP21.7■■□□□ 1.06
FAM228B-208ENST00000613899 PAQR7Q86WK9 346 aa21.7■■□□□ 1.06
FAM228B-208ENST00000613899 CPNE9Q8IYJ1 553 aa21.7■■□□□ 1.06
FAM228B-208ENST00000613899 C2CD4AQ8NCU7 369 aaPredicted RBP21.7■■□□□ 1.06
FAM228B-208ENST00000613899 GALNT11Q8NCW6 608 aa21.7■■□□□ 1.06
FAM228B-208ENST00000613899 TM9SF4Q92544 642 aa21.7■■□□□ 1.06
FAM228B-208ENST00000613899 CABS1Q96KC9 395 aa21.7■■□□□ 1.06
FAM228B-208ENST00000613899 MFRPQ9BY79 579 aa21.7■■□□□ 1.06
FAM228B-208ENST00000613899 SOX17Q9H6I2 414 aaPredicted RBP21.7■■□□□ 1.06
FAM228B-208ENST00000613899 SEMA3GQ9NS98 782 aa21.7■■□□□ 1.06
FAM228B-208ENST00000613899 TRMT6Q9UJA5 497 aaKnown RBP21.7■■□□□ 1.06
FAM228B-208ENST00000613899 MAP4K5Q9Y4K4 846 aa21.7■■□□□ 1.06
FAM228B-208ENST00000613899 MAU2Q9Y6X3 613 aa21.7■■□□□ 1.06
FAM228B-208ENST00000613899 RP1L1Q8IWN7 2480 aaPredicted RBP21.69■■□□□ 1.06
FAM228B-208ENST00000613899 CLEC18AA5D8T8 446 aa21.69■■□□□ 1.06
FAM228B-208ENST00000613899 VSTM2BA6NLU5 285 aa21.69■■□□□ 1.06
FAM228B-208ENST00000613899 H0YGG7 62 aa21.69■■□□□ 1.06
FAM228B-208ENST00000613899 SMAPO00193 183 aa21.69■■□□□ 1.06
FAM228B-208ENST00000613899 SKIV2L2P42285 1042 aaKnown RBP21.69■■□□□ 1.06
FAM228B-208ENST00000613899 ARF3P61204 181 aaPredicted RBP21.69■■□□□ 1.06
FAM228B-208ENST00000613899 OCA2Q04671 838 aa21.69■■□□□ 1.06
FAM228B-208ENST00000613899 DHX9Q08211 1270 aaKnown RBP21.69■■□□□ 1.06
FAM228B-208ENST00000613899 RBBP7Q16576 425 aa21.69■■□□□ 1.06
FAM228B-208ENST00000613899 PRTGQ2VWP7 1150 aa21.69■■□□□ 1.06
FAM228B-208ENST00000613899 SPANXN3Q5MJ09 141 aa21.69■■□□□ 1.06
FAM228B-208ENST00000613899 ZNF425Q6IV72 752 aa21.69■■□□□ 1.06
FAM228B-208ENST00000613899 FBXO42Q6P3S6 717 aa21.69■■□□□ 1.06
FAM228B-208ENST00000613899 CLEC18BQ6UXF7 455 aa21.69■■□□□ 1.06
FAM228B-208ENST00000613899 UBE2R2Q712K3 238 aaPredicted RBP21.69■■□□□ 1.06
FAM228B-208ENST00000613899 TMEM151BQ8IW70 566 aa21.69■■□□□ 1.06
FAM228B-208ENST00000613899 FAM26EQ8N5C1 309 aa21.69■■□□□ 1.06
FAM228B-208ENST00000613899 CLEC18CQ8NCF0 446 aa21.69■■□□□ 1.06
FAM228B-208ENST00000613899 PPFIBP2Q8ND30 876 aa21.69■■□□□ 1.06
FAM228B-208ENST00000613899 COL26A1Q96A83 441 aa21.69■■□□□ 1.06
FAM228B-208ENST00000613899 MVB12AQ96EY5 273 aa21.69■■□□□ 1.06
FAM228B-208ENST00000613899 C10orf90Q96M02 699 aa21.69■■□□□ 1.06
FAM228B-208ENST00000613899 EBNA1BP2Q99848 306 aaKnown RBP21.69■■□□□ 1.06
FAM228B-208ENST00000613899 ZNF552Q9H707 407 aaPredicted RBP21.69■■□□□ 1.06
FAM228B-208ENST00000613899 ZNF282Q9UDV7 671 aaPredicted RBP21.69■■□□□ 1.06
FAM228B-208ENST00000613899 FBXL4Q9UKA2 621 aa21.69■■□□□ 1.06
FAM228B-208ENST00000613899 IGKV1-8A0A0C4DH67 115 aa21.68■■□□□ 1.06
FAM228B-208ENST00000613899 SOCS6O14544 535 aa21.68■■□□□ 1.06
FAM228B-208ENST00000613899 PRPF4O43172 522 aaKnown RBP eCLIP21.68■■□□□ 1.06
FAM228B-208ENST00000613899 MED26O95402 600 aa21.68■■□□□ 1.06
FAM228B-208ENST00000613899 ITGA3P26006 1051 aa21.68■■□□□ 1.06
FAM228B-208ENST00000613899 CARSP49589 748 aaKnown RBP21.68■■□□□ 1.06
FAM228B-208ENST00000613899 RGS4P49798 205 aa21.68■■□□□ 1.06
FAM228B-208ENST00000613899 RELAQ04206 551 aa21.68■■□□□ 1.06
FAM228B-208ENST00000613899 THEMIS2Q5TEJ8 643 aa21.68■■□□□ 1.06
FAM228B-208ENST00000613899 PRAMEF13Q5VWM6 474 aa21.68■■□□□ 1.06
FAM228B-208ENST00000613899 IGFL3Q6UXB1 125 aa21.68■■□□□ 1.06
FAM228B-208ENST00000613899 CYHR1Q6ZMK1 362 aa21.68■■□□□ 1.06
FAM228B-208ENST00000613899 SHISA6Q6ZSJ9 500 aa21.68■■□□□ 1.06
FAM228B-208ENST00000613899 PIWIL4Q7Z3Z4 852 aaKnown RBP21.68■■□□□ 1.06
FAM228B-208ENST00000613899 DTWD1Q8N5C7 304 aa21.68■■□□□ 1.06
FAM228B-208ENST00000613899 CSNK1A1LQ8N752 337 aa21.68■■□□□ 1.06
FAM228B-208ENST00000613899 Q8NA96 180 aa21.68■■□□□ 1.06
FAM228B-208ENST00000613899 RERGQ96A58 199 aaPredicted RBP21.68■■□□□ 1.06
FAM228B-208ENST00000613899 RUNDC3BQ96NL0 473 aa21.68■■□□□ 1.06
FAM228B-208ENST00000613899 TAS2R13Q9NYV9 303 aa21.68■■□□□ 1.06
FAM228B-208ENST00000613899 CDC14AQ9UNH5 594 aa21.68■■□□□ 1.06
FAM228B-208ENST00000613899 HS3ST3B1Q9Y662 390 aa21.68■■□□□ 1.06
FAM228B-208ENST00000613899 SHANK1Q9Y566 2161 aa21.68■■□□□ 1.06
FAM228B-208ENST00000613899 FBLP22087 321 aaKnown RBP21.67■■□□□ 1.06
FAM228B-208ENST00000613899 IMPA1P29218 277 aa21.67■■□□□ 1.06
FAM228B-208ENST00000613899 INPP5JQ15735 1006 aaPredicted RBP21.67■■□□□ 1.06
FAM228B-208ENST00000613899 TUBB8Q3ZCM7 444 aa21.67■■□□□ 1.06
FAM228B-208ENST00000613899 IRAK1BP1Q5VVH5 260 aa21.67■■□□□ 1.06
FAM228B-208ENST00000613899 GARNL3Q5VVW2 1013 aa21.67■■□□□ 1.06
FAM228B-208ENST00000613899 KIAA0408Q6ZU52 694 aa21.67■■□□□ 1.06
FAM228B-208ENST00000613899 SYDE1Q6ZW31 735 aaPredicted RBP21.67■■□□□ 1.06
FAM228B-208ENST00000613899 ADCK2Q7Z695 626 aa21.67■■□□□ 1.06
FAM228B-208ENST00000613899 CNTN4Q8IWV2 1026 aa21.67■■□□□ 1.06
FAM228B-208ENST00000613899 STT3BQ8TCJ2 826 aa21.67■■□□□ 1.06
FAM228B-208ENST00000613899 MIEF2Q96C03 454 aa21.67■■□□□ 1.06
FAM228B-208ENST00000613899 NDNQ99608 321 aa21.67■■□□□ 1.06
FAM228B-208ENST00000613899 CRB3Q9BUF7 120 aa21.67■■□□□ 1.06
FAM228B-208ENST00000613899 LUZP4Q9P127 313 aa21.67■■□□□ 1.06
FAM228B-208ENST00000613899 RUVBL1Q9Y265 456 aaKnown RBP21.67■■□□□ 1.06
FAM228B-208ENST00000613899 TXNDC9O14530 226 aa21.66■■□□□ 1.06
FAM228B-208ENST00000613899 C8GP07360 202 aa21.66■■□□□ 1.06
FAM228B-208ENST00000613899 KLC1Q07866 573 aa21.66■■□□□ 1.06
FAM228B-208ENST00000613899 SP140Q13342 867 aa21.66■■□□□ 1.06
FAM228B-208ENST00000613899 MORF4L2Q15014 288 aa21.66■■□□□ 1.06
FAM228B-208ENST00000613899 BBS9Q3SYG4 887 aa21.66■■□□□ 1.06
FAM228B-208ENST00000613899 KIRREL2Q6UWL6 708 aa21.66■■□□□ 1.06
FAM228B-208ENST00000613899 PALM2Q8IXS6 379 aa21.66■■□□□ 1.06
FAM228B-208ENST00000613899 LRRC56Q8IYG6 542 aaPredicted RBP21.66■■□□□ 1.06
FAM228B-208ENST00000613899 IQCKQ8N0W5 287 aa21.66■■□□□ 1.06
FAM228B-208ENST00000613899 PDIK1LQ8N165 341 aa21.66■■□□□ 1.06
FAM228B-208ENST00000613899 MCOLN3Q8TDD5 553 aa21.66■■□□□ 1.06
FAM228B-208ENST00000613899 CERS2Q96G23 380 aa21.66■■□□□ 1.06
FAM228B-208ENST00000613899 OR2A5Q96R48 311 aa21.66■■□□□ 1.06
FAM228B-208ENST00000613899 SLC29A3Q9BZD2 475 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms