RNA–Protein interactions for RNA: ENST00000613788.1

CD48-203, Transcript of CD48 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD48, Length 1,500 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD48-203ENST00000613788 CCR8P51685 355 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 IRF8Q02556 426 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 GALNT1Q10472 559 aaPredicted RBP14.15□□□□□ -0.14
CD48-203ENST00000613788 LCP2Q13094 533 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 CHIT1Q13231 466 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 RCN2Q14257 317 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 TBCCQ15814 346 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 XKR6Q5GH73 641 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 LIPJQ5W064 366 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 FIGLAQ6QHK4 219 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 SLCO4C1Q6ZQN7 724 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 RPS27LQ71UM5 84 aaKnown RBP14.15□□□□□ -0.14
CD48-203ENST00000613788 MILR1Q7Z6M3 343 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 TMPRSS11BQ86T26 416 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 TRIM73Q86UV7 250 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 FAM20CQ8IXL6 584 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 FAM122AQ96E09 287 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 MOCOSQ96EN8 888 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 PRAP1Q96NZ9 151 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 MAP3K3Q99759 626 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 NTMT1Q9BV86 223 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 ACTR8Q9H981 624 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 PELI2Q9HAT8 420 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 PDP2Q9P2J9 529 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 KLHL3Q9UH77 587 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 KLK4Q9Y5K2 254 aa14.15□□□□□ -0.14
CD48-203ENST00000613788 D6RAR5 112 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 E7EQ34 232 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 OR7A17O14581 309 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 KLF11O14901 512 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 UGDHO60701 494 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 CLDN9O95484 217 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 EBLN1P0CF75 366 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 TSPAN8P19075 237 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 EPORP19235 508 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 MAGP20916 626 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 GRK3P35626 688 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 CASP2P42575 452 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 PKNOX1P55347 436 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 ABCE1P61221 599 aaKnown RBP14.14□□□□□ -0.15
CD48-203ENST00000613788 YBX1P67809 324 aaKnown RBP14.14□□□□□ -0.15
CD48-203ENST00000613788 SIM1P81133 766 aaPredicted RBP14.14□□□□□ -0.15
CD48-203ENST00000613788 LAPTM5Q13571 262 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 HIST2H2ACQ16777 129 aaPredicted RBP14.14□□□□□ -0.15
CD48-203ENST00000613788 PAGE2BQ5JRK9 111 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 SNAP47Q5SQN1 464 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 CATSPEREQ5SY80 951 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 ATG9BQ674R7 924 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 HIST2H2AA3Q6FI13 130 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 ZNF574Q6ZN55 896 aaPredicted RBP14.14□□□□□ -0.15
CD48-203ENST00000613788 RBM44Q6ZP01 1051 aaKnown RBP14.14□□□□□ -0.15
CD48-203ENST00000613788 PRSS42Q7Z5A4 293 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 ADCK2Q7Z695 626 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 KMT5CQ86Y97 462 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 OR4K1Q8NGD4 311 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 LRRC8CQ8TDW0 803 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 CKAP2Q8WWK9 683 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 ZNF75CPQ92670 426 aaPredicted RBP14.14□□□□□ -0.15
CD48-203ENST00000613788 PTCD3Q96EY7 689 aaKnown RBP14.14□□□□□ -0.15
CD48-203ENST00000613788 TRAPPC9Q96Q05 1148 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 ZNF382Q96SR6 550 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 AIF1LQ9BQI0 150 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 PLCD4Q9BRC7 762 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 RTKNQ9BST9 563 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 EFCAB11Q9BUY7 163 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 SLC6A20Q9NP91 592 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 CUEDC1Q9NWM3 386 aaPredicted RBP14.14□□□□□ -0.15
CD48-203ENST00000613788 TOR4AQ9NXH8 423 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 TMEM9Q9P0T7 183 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 SEMA5BQ9P283 1151 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 SH2B3Q9UQQ2 575 aa14.14□□□□□ -0.15
CD48-203ENST00000613788 FAM186AA6NE01 2351 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 ZNF292O60281 2723 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 IGHV5-10-1A0A0J9YXX1 117 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 SLC9B1P1A6NJY1 282 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 TMX2-CTNND1H3BSU7 103 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 CASC3O15234 703 aaKnown RBP14.13□□□□□ -0.15
CD48-203ENST00000613788 KIF1CO43896 1103 aaKnown RBP14.13□□□□□ -0.15
CD48-203ENST00000613788 WFS1O76024 890 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 ZBTB11O95625 1053 aaPredicted RBP14.13□□□□□ -0.15
CD48-203ENST00000613788 HSPA4LO95757 839 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 MPSTP25325 297 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 HNF4AP41235 474 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 LSSP48449 732 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 SLC1A6P48664 564 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 ARL4DP49703 201 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 NOVA1P51513 510 aaKnown RBP14.13□□□□□ -0.15
CD48-203ENST00000613788 RELAQ04206 551 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 TRA2AQ13595 282 aaKnown RBP eCLIP14.13□□□□□ -0.15
CD48-203ENST00000613788 DOC2AQ14183 400 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 RSPO4Q2I0M5 234 aaPredicted RBP14.13□□□□□ -0.15
CD48-203ENST00000613788 ARL13AQ5H913 290 aaPredicted RBP14.13□□□□□ -0.15
CD48-203ENST00000613788 ZNF425Q6IV72 752 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 TMPRSS9Q7Z410 1059 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 HOMEZQ8IX15 550 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 KRT78Q8N1N4 520 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 TBC1D19Q8N5T2 526 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 OR52B6Q8NGF0 335 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 WDR34Q96EX3 536 aa14.13□□□□□ -0.15
CD48-203ENST00000613788 TCTN2Q96GX1 697 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms