RNA–Protein interactions for RNA: ENST00000613228.1

PDE6A-204, Transcript of phosphodiesterase 6A, humanhuman

TSL 5 BASIC

Gene PDE6A, Length 5,398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-204ENST00000613228 FBXW4P57775 412 aa8.5□□□□□ -1.05
PDE6A-204ENST00000613228 WDR5P61964 334 aaKnown RBP8.5□□□□□ -1.05
PDE6A-204ENST00000613228 NFATC2Q13469 925 aa8.5□□□□□ -1.05
PDE6A-204ENST00000613228 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.5□□□□□ -1.05
PDE6A-204ENST00000613228 GCNT7Q6ZNI0 430 aa8.5□□□□□ -1.05
PDE6A-204ENST00000613228 ANKRD33Q7Z3H0 272 aa8.5□□□□□ -1.05
PDE6A-204ENST00000613228 GOLGA7Q7Z5G4 137 aa8.5□□□□□ -1.05
PDE6A-204ENST00000613228 C3orf58Q8NDZ4 430 aa8.5□□□□□ -1.05
PDE6A-204ENST00000613228 SLC13A3Q8WWT9 602 aa8.5□□□□□ -1.05
PDE6A-204ENST00000613228 RBM4BQ9BQ04 359 aaKnown RBP8.5□□□□□ -1.05
PDE6A-204ENST00000613228 RBM4Q9BWF3 364 aaKnown RBP8.5□□□□□ -1.05
PDE6A-204ENST00000613228 CPEB1Q9BZB8 566 aaKnown RBP8.5□□□□□ -1.05
PDE6A-204ENST00000613228 TMEM168Q9H0V1 697 aa8.5□□□□□ -1.05
PDE6A-204ENST00000613228 ALG2Q9H553 416 aa8.5□□□□□ -1.05
PDE6A-204ENST00000613228 WDR26Q9H7D7 661 aa8.5□□□□□ -1.05
PDE6A-204ENST00000613228 KRBA1A5PL33 1030 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 TGM5O43548 720 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 VEGFDO43915 354 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 ALDOAP04075 364 aaKnown RBP8.49□□□□□ -1.05
PDE6A-204ENST00000613228 CSF2RAP15509 400 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 HRH2P25021 359 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 HTR2BP41595 481 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 GDI2P50395 445 aaKnown RBP8.49□□□□□ -1.05
PDE6A-204ENST00000613228 NFKB2Q00653 900 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 LIPEQ05469 1076 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 ZNF181Q2M3W8 571 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 MBOAT1Q6ZNC8 495 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 ZNF605Q86T29 641 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 CFAP206Q8IYR0 622 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 OR8K3Q8NH51 312 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 ARNTL2Q8WYA1 636 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 CPNE5Q9HCH3 593 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 ZBTB26Q9HCK0 441 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 EXD2Q9NVH0 621 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 ZSCAN32Q9NX65 697 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 SCN9AQ15858 1988 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 COL4A5P29400 1685 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 PTGES3LE9PB15 166 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 AURKAO14965 403 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 ANXA4P09525 319 aaPredicted RBP8.49□□□□□ -1.05
PDE6A-204ENST00000613228 ALPIP09923 528 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 PSKH1P11801 424 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 NR4A1P22736 598 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 E2F2Q14209 437 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 POM121L1PQ3SYA9 428 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 CLVS2Q5SYC1 327 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 HDDC3Q8N4P3 179 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 ANKRD53Q8N9V6 530 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 C7orf57Q8NEG2 295 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 MYDGFQ969H8 173 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 CENPNQ96H22 339 aaPredicted RBP8.49□□□□□ -1.05
PDE6A-204ENST00000613228 MYRFLQ96LU7 910 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 NECTIN4Q96NY8 510 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 CCDC106Q9BWC9 280 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 CD84Q9UIB8 345 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 PPM1HQ9ULR3 514 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 MRPS7Q9Y2R9 242 aaKnown RBP8.49□□□□□ -1.05
PDE6A-204ENST00000613228 FAM92AA1XBS5 289 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 MEIS3P2A8K0S8 358 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 MANBAO00462 879 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 CCL22O00626 93 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 PRMT3O60678 531 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 NIPSNAP2O75323 286 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 CST1P01037 141 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 HPGDP15428 266 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 AMD1P17707 334 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 SLC6A2P23975 617 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 SOX11P35716 441 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 GSTM5P46439 218 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 CCR8P51685 355 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 SCN1BQ07699 218 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 VWA5B1Q5TIE3 1220 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 LIPJQ5W064 366 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 HLA-DQA1Q5Y7H0 255 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 PLET1Q6UQ28 207 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 ARHGAP12Q8IWW6 846 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 ARL5BQ96KC2 179 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 WRAP53Q9BUR4 548 aaKnown RBP8.49□□□□□ -1.05
PDE6A-204ENST00000613228 GULP1Q9UBP9 304 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 MRTO4Q9UKD2 239 aaKnown RBP8.49□□□□□ -1.05
PDE6A-204ENST00000613228 CXorf51AA0A1B0GTR3 108 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 ISM1B1AKI9 464 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 CLDN7O95471 211 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 OAS1P00973 400 aaKnown RBP8.49□□□□□ -1.05
PDE6A-204ENST00000613228 CHRNGP07510 517 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 IGFBP4P22692 258 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 ITPRIPL2Q3MIP1 535 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 GLYATQ6IB77 296 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.49□□□□□ -1.05
PDE6A-204ENST00000613228 MSANTD1Q6ZTZ1 278 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 OR14C36Q8NHC7 312 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 FBXO30Q8TB52 745 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 MAGEE2Q8TD90 523 aaPredicted RBP8.49□□□□□ -1.05
PDE6A-204ENST00000613228 NCSTNQ92542 709 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 RPL10LQ96L21 214 aaKnown RBP8.49□□□□□ -1.05
PDE6A-204ENST00000613228 LRRC3Q9BY71 257 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 SAV1Q9H4B6 383 aaPredicted RBP8.49□□□□□ -1.05
PDE6A-204ENST00000613228 GPRC5BQ9NZH0 403 aa8.49□□□□□ -1.05
PDE6A-204ENST00000613228 AKAP7Q9P0M2 348 aaPredicted RBP8.49□□□□□ -1.05
PDE6A-204ENST00000613228 SLC17A6Q9P2U8 582 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms