RNA–Protein interactions for RNA: ENST00000613099.4

VPS13D-213, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13D, Length 16,245 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-213ENST00000613099 RAB10P61026 200 aa4.84□□□□□ -1.64
VPS13D-213ENST00000613099 TGFB2P61812 414 aa4.84□□□□□ -1.64
VPS13D-213ENST00000613099 BTG1P62324 171 aa4.84□□□□□ -1.64
VPS13D-213ENST00000613099 CHRNA6Q15825 494 aa4.84□□□□□ -1.64
VPS13D-213ENST00000613099 RD3Q7Z3Z2 195 aa4.84□□□□□ -1.64
VPS13D-213ENST00000613099 GJD3Q8N144 294 aa4.84□□□□□ -1.64
VPS13D-213ENST00000613099 SLC7A6Q92536 515 aa4.84□□□□□ -1.64
VPS13D-213ENST00000613099 LRRN3Q9H3W5 708 aa4.84□□□□□ -1.64
VPS13D-213ENST00000613099 CCDC86Q9H6F5 360 aaKnown RBP4.84□□□□□ -1.64
VPS13D-213ENST00000613099 CNTNAP1P78357 1384 aa4.84□□□□□ -1.64
VPS13D-213ENST00000613099 OR5K3A6NET4 321 aa4.84□□□□□ -1.64
VPS13D-213ENST00000613099 QSOX1O00391 747 aa4.84□□□□□ -1.64
VPS13D-213ENST00000613099 CDC123O75794 336 aaPredicted RBP4.84□□□□□ -1.64
VPS13D-213ENST00000613099 TOR2AQ5JU69 321 aa4.84□□□□□ -1.64
VPS13D-213ENST00000613099 SLC22A25Q6T423 547 aa4.84□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF621Q6ZSS3 439 aa4.84□□□□□ -1.64
VPS13D-213ENST00000613099 GPR65Q8IYL9 337 aa4.84□□□□□ -1.64
VPS13D-213ENST00000613099 LRCH3Q96II8 777 aa4.84□□□□□ -1.64
VPS13D-213ENST00000613099 MAPTP10636 758 aaKnown RBP4.83□□□□□ -1.64
VPS13D-213ENST00000613099 PTAFRP25105 342 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 PPP2R1BP30154 601 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 PNPLA4P41247 253 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 TGM4P49221 684 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 PFKFB4Q16877 469 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 SLC36A3Q495N2 470 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 PLA2G4FQ68DD2 849 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 GPRIN3Q6ZVF9 776 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 APTXQ7Z2E3 356 aaKnown RBP4.83□□□□□ -1.64
VPS13D-213ENST00000613099 PLD6Q8N2A8 252 aaKnown RBP4.83□□□□□ -1.64
VPS13D-213ENST00000613099 CACNG6Q9BXT2 260 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 MCCC2Q9HCC0 563 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 SALL4Q9UJQ4 1053 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 MINPP1Q9UNW1 487 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 TNS3Q68CZ2 1445 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF705GA8MUZ8 300 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-213ENST00000613099 FOXO6A8MYZ6 492 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 TNFRSF11BO00300 401 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 SLC16A4O15374 487 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 TGOLN2O43493 480 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 FKTNO75072 461 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 UBXN7O94888 489 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 FABP3P05413 133 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 PCSK6P29122 969 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 RACK1P63244 317 aaKnown RBP4.83□□□□□ -1.64
VPS13D-213ENST00000613099 FBXO48Q5FWF7 155 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 IQCHQ86VS3 1027 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 SULF1Q8IWU6 871 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 GLB1L3Q8NCI6 653 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-213ENST00000613099 DTD1Q8TEA8 209 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 TNKS2Q9H2K2 1166 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 RHOJQ9H4E5 214 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 DTLQ9NZJ0 730 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 MYEF2Q9P2K5 600 aaKnown RBP4.83□□□□□ -1.64
VPS13D-213ENST00000613099 TRPS1Q9UHF7 1281 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 FAM234BA2RU67 622 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 A8MVJ9 347 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 ZSCAN5DPP0CG00 497 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 UBAP2Q5T6F2 1119 aaKnown RBP4.83□□□□□ -1.64
VPS13D-213ENST00000613099 SLC25A25Q6KCM7 469 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 UQCC3Q6UW78 93 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 HHIPL2Q6UWX4 724 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 CD163Q86VB7 1156 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 CDK20Q8IZL9 346 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 FTMTQ8N4E7 242 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 REV1Q9UBZ9 1251 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 SLC25A13Q9UJS0 675 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 SARDHQ9UL12 918 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 NOBOXO60393 691 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 MECP2P51608 486 aaKnown RBP4.83□□□□□ -1.64
VPS13D-213ENST00000613099 TRIM46Q7Z4K8 759 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 VGLL2Q8N8G2 317 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 ZNF675Q8TD23 568 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 TMBIM1Q969X1 311 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 FCRL1Q96LA6 429 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 SAP130Q9H0E3 1048 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 NANOGQ9H9S0 305 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 ENAMQ9NRM1 1142 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 CD48P09326 243 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 PIM1P11309 404 aaPredicted RBP4.83□□□□□ -1.64
VPS13D-213ENST00000613099 CA5AP35218 305 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 GZMKP49863 264 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 DLX5P56178 289 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 VAMP2P63027 116 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 SPOCK1Q08629 439 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 ADIPOR2Q86V24 386 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 OR52N1Q8NH53 320 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 CD101Q93033 1021 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 C7orf50Q9BRJ6 194 aaKnown RBP4.83□□□□□ -1.64
VPS13D-213ENST00000613099 SARS2Q9NP81 518 aaKnown RBP4.83□□□□□ -1.64
VPS13D-213ENST00000613099 TAS2R14Q9NYV8 317 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 A0A087WZY1 265 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 LOC105371267A0A1B0GV96 52 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 CXCR6O00574 342 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 TERTO14746 1132 aaKnown RBP4.83□□□□□ -1.64
VPS13D-213ENST00000613099 MAOAP21397 527 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 MARCKSL1P49006 195 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 CDH17Q12864 832 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 NAE1Q13564 534 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 RAB33AQ14088 237 aa4.83□□□□□ -1.64
VPS13D-213ENST00000613099 TSTQ16762 297 aaKnown RBP4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms