RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 LINGO1Q96FE5 620 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 ELL3Q9HB65 397 aaPredicted RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 MRM3Q9HC36 420 aaKnown RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 DIP2AQ14689 1571 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 GADD45GO95257 159 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 CPN2P22792 545 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 OR1E1P30953 314 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 STT3AP46977 705 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 PLA2G16P53816 162 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 PCK2Q16822 640 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 Q3C1V9 767 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 KRBOX4Q5JUW0 171 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 MAP1SQ66K74 1059 aaPredicted RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 KIAA1161Q6NSJ0 714 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 MON1BQ7L1V2 547 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 FAM83AQ86UY5 434 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 GPER1Q99527 375 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 GNG8Q9UK08 70 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 EEDO75530 441 aaKnown RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 TSPAN15O95858 294 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 CSF1P09603 554 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 PRDX5P30044 214 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 CLCQ05315 142 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 RNF212Q495C1 297 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 STRADAQ7RTN6 431 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 LRRC70Q7Z2Q7 622 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 PCDHB18PQ96TA0 734 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 OR51J1Q9H342 316 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 ABCC13Q9NSE7 274 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 BTRCQ9Y297 605 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 SLC33A1O00400 549 aaPredicted RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 RBMS1P29558 406 aaKnown RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 CAPN13Q6MZZ7 669 aaPredicted RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 SKA3Q8IX90 412 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 LGI4Q8N135 537 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 OR10H5Q8NGA6 315 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 ADAMTS16Q8TE57 1224 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 MFSD14AQ96MC6 490 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 SMCO4Q9NRQ5 59 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 MRPS33Q9Y291 106 aaKnown RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 E9PI62 339 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 RBMXL2O75526 392 aaKnown RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 ZNF33BQ06732 778 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 HNRNPA0Q13151 305 aaKnown RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 COL13A1Q5TAT6 717 aaPredicted RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 TREML1Q86YW5 311 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 EFCAB3Q8N7B9 438 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 PCSK9Q8NBP7 692 aaKnown RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 WDR55Q9H6Y2 383 aaPredicted RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 OR12D3Q9UGF7 316 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 ARHGAP23Q9P227 1491 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 FLRT2O43155 660 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 COL6A1P12109 1028 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 MAOBP27338 520 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 RNF44Q7L0R7 432 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 ZC3HC1Q86WB0 502 aaKnown RBP8.57□□□□□ -1.04
TTC28-208ENST00000612946 MARCH9Q86YJ5 346 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 OR5H6Q8NGV6 325 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 PSD2Q9BQI7 771 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 MCMBPQ9BTE3 642 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 DNTTIP1Q9H147 329 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 PIDD1Q9HB75 910 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 RIMKLBQ9ULI2 386 aa8.57□□□□□ -1.04
TTC28-208ENST00000612946 A0A1W2PQ67 120 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 ACVR2AP27037 513 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 EVI2BP34910 448 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 OGDHQ02218 1023 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 SAMD12Q8N8I0 201 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 NEIL3Q8TAT5 605 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 ZNF490Q9ULM2 529 aaPredicted RBP8.56□□□□□ -1.04
TTC28-208ENST00000612946 CNTNAP2Q9UHC6 1331 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 SLC1A7O00341 560 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 SLC34A2O95436 690 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 OAZ1P54368 228 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 CDK10Q15131 360 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 HECTD2Q5U5R9 776 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 ZFPM1Q8IX07 1006 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 ELP5Q8TE02 316 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 GPRC5BQ9NZH0 403 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 CLTCQ00610 1675 aaKnown RBP8.56□□□□□ -1.04
TTC28-208ENST00000612946 SEC16AO15027 2179 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 C17orf113A0A1B0GUU1 675 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 H7C417 338 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 H1F0P07305 194 aaKnown RBP8.56□□□□□ -1.04
TTC28-208ENST00000612946 BAK1Q16611 211 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 ATAD3CQ5T2N8 411 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 HJURPQ8NCD3 748 aaPredicted RBP8.56□□□□□ -1.04
TTC28-208ENST00000612946 AGO4Q9HCK5 861 aaKnown RBP8.56□□□□□ -1.04
TTC28-208ENST00000612946 SLC22A11Q9NSA0 550 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 KCTD5Q9NXV2 234 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 CFAP97Q9P2B7 532 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 ABT1Q9ULW3 272 aaKnown RBP8.56□□□□□ -1.04
TTC28-208ENST00000612946 MYO5AQ9Y4I1 1855 aaKnown RBP8.56□□□□□ -1.04
TTC28-208ENST00000612946 CYB561D2O14569 222 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 C8GP07360 202 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 CDH15P55291 814 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 VSX2P58304 361 aaPredicted RBP8.56□□□□□ -1.04
TTC28-208ENST00000612946 S100A10P60903 97 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 ARL6IP1Q15041 203 aa8.56□□□□□ -1.04
TTC28-208ENST00000612946 MBLAC2Q68D91 279 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms