RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 ATP6AP2O75787 350 aa16.91■□□□□ 0.3
SREK1-216ENST00000612404 KRT6AP02538 564 aa16.91■□□□□ 0.3
SREK1-216ENST00000612404 KRT6BP04259 564 aa16.91■□□□□ 0.3
SREK1-216ENST00000612404 GIMD1P0DJR0 217 aa16.91■□□□□ 0.3
SREK1-216ENST00000612404 HNF4AP41235 474 aa16.91■□□□□ 0.3
SREK1-216ENST00000612404 KRT6CP48668 564 aa16.91■□□□□ 0.3
SREK1-216ENST00000612404 PPM1FP49593 454 aaPredicted RBP16.91■□□□□ 0.3
SREK1-216ENST00000612404 CCT8P50990 548 aa16.91■□□□□ 0.3
SREK1-216ENST00000612404 MEF2AQ02078 507 aaPredicted RBP16.91■□□□□ 0.3
SREK1-216ENST00000612404 PRDX1Q06830 199 aaKnown RBP16.91■□□□□ 0.3
SREK1-216ENST00000612404 PCDH1Q08174 1060 aa16.91■□□□□ 0.3
SREK1-216ENST00000612404 ABRAXAS2Q15018 415 aa16.91■□□□□ 0.3
SREK1-216ENST00000612404 TBCCQ15814 346 aa16.91■□□□□ 0.3
SREK1-216ENST00000612404 GRHL2Q6ISB3 625 aa16.91■□□□□ 0.3
SREK1-216ENST00000612404 ACAD11Q709F0 780 aa16.91■□□□□ 0.3
SREK1-216ENST00000612404 C17orf82Q86X59 251 aaPredicted RBP16.91■□□□□ 0.3
SREK1-216ENST00000612404 SLC22A18Q96BI1 424 aa16.91■□□□□ 0.3
SREK1-216ENST00000612404 OR52B2Q96RD2 323 aa16.91■□□□□ 0.3
SREK1-216ENST00000612404 SLC38A3Q99624 504 aa16.91■□□□□ 0.3
SREK1-216ENST00000612404 MRPS30Q9NP92 439 aaKnown RBP16.91■□□□□ 0.3
SREK1-216ENST00000612404 TCF7L2Q9NQB0 619 aa16.91■□□□□ 0.3
SREK1-216ENST00000612404 FARSBQ9NSD9 589 aaKnown RBP16.91■□□□□ 0.3
SREK1-216ENST00000612404 HRASLS2Q9NWW9 162 aa16.91■□□□□ 0.3
SREK1-216ENST00000612404 NLGN3Q9NZ94 848 aa16.91■□□□□ 0.3
SREK1-216ENST00000612404 HEY2Q9UBP5 337 aa16.91■□□□□ 0.3
SREK1-216ENST00000612404 ARID1BQ8NFD5 2236 aaPredicted RBP16.9■□□□□ 0.3
SREK1-216ENST00000612404 RHPN2P1A8MT19 583 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 H7BY64 318 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 SDHDO14521 159 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 KHNYNO15037 678 aaKnown RBP16.9■□□□□ 0.3
SREK1-216ENST00000612404 PRICKLE3O43900 615 aaPredicted RBP16.9■□□□□ 0.3
SREK1-216ENST00000612404 ALPPL2P10696 532 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 TYRP1P17643 537 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 CASP2P42575 452 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 IFT88Q13099 833 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 SLBPQ14493 270 aaKnown RBP eCLIP16.9■□□□□ 0.3
SREK1-216ENST00000612404 PAGE2BQ5JRK9 111 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 ADCK2Q7Z695 626 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 ALYREFQ86V81 257 aaKnown RBP16.9■□□□□ 0.3
SREK1-216ENST00000612404 SLC35F3Q8IY50 421 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 C3orf30Q96M34 536 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 PRAP1Q96NZ9 151 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 PLCD4Q9BRC7 762 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 LRFN3Q9BTN0 628 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 EFCAB11Q9BUY7 163 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.9■□□□□ 0.3
SREK1-216ENST00000612404 EHD1Q9H4M9 534 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 PFDN4Q9NQP4 134 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 GEMIN8Q9NWZ8 242 aaKnown RBP16.9■□□□□ 0.3
SREK1-216ENST00000612404 ZNF490Q9ULM2 529 aaPredicted RBP16.9■□□□□ 0.3
SREK1-216ENST00000612404 FAM221BA6H8Z2 402 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 ENGP17813 658 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 CCR8P51685 355 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 NEK2P51955 445 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 ATXN3P54252 364 aaPredicted RBP16.9■□□□□ 0.3
SREK1-216ENST00000612404 INHBCP55103 352 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 KIR2DS3Q14952 304 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 LAIR1Q6GTX8 287 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 KANSL1Q7Z3B3 1105 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 CHCHD4Q8N4Q1 142 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 OR2L3Q8NG85 312 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 SELENOMQ8WWX9 145 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 DUSP23Q9BVJ7 150 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 PCDH15Q96QU1 1955 aa16.9■□□□□ 0.3
SREK1-216ENST00000612404 E9PBE3 544 aa16.89■□□□□ 0.29
SREK1-216ENST00000612404 KLHL41O60662 606 aa16.89■□□□□ 0.29
SREK1-216ENST00000612404 UBXN7O94888 489 aa16.89■□□□□ 0.29
SREK1-216ENST00000612404 CCNDBP1O95273 360 aa16.89■□□□□ 0.29
SREK1-216ENST00000612404 MYF5P13349 255 aa16.89■□□□□ 0.29
SREK1-216ENST00000612404 CMPK1P30085 196 aa16.89■□□□□ 0.29
SREK1-216ENST00000612404 ABATP80404 500 aa16.89■□□□□ 0.29
SREK1-216ENST00000612404 HIST2H2ACQ16777 129 aaPredicted RBP16.89■□□□□ 0.29
SREK1-216ENST00000612404 FRG2Q64ET8 278 aa16.89■□□□□ 0.29
SREK1-216ENST00000612404 HIST2H2AA3Q6FI13 130 aa16.89■□□□□ 0.29
SREK1-216ENST00000612404 OOSP2Q86WS3 158 aa16.89■□□□□ 0.29
SREK1-216ENST00000612404 WDR34Q96EX3 536 aa16.89■□□□□ 0.29
SREK1-216ENST00000612404 FRG2BQ96QU4 278 aa16.89■□□□□ 0.29
SREK1-216ENST00000612404 PELI2Q9HAT8 420 aa16.89■□□□□ 0.29
SREK1-216ENST00000612404 ACTR10Q9NZ32 417 aa16.89■□□□□ 0.29
SREK1-216ENST00000612404 LRIT1Q9P2V4 623 aa16.89■□□□□ 0.29
SREK1-216ENST00000612404 PCDHGA11Q9Y5H2 935 aa16.89■□□□□ 0.29
SREK1-216ENST00000612404 RNF215Q9Y6U7 377 aa16.89■□□□□ 0.29
SREK1-216ENST00000612404 C2orf74A8MZ97 194 aa16.88■□□□□ 0.29
SREK1-216ENST00000612404 SNRNP200O75643 2136 aaKnown RBP16.88■□□□□ 0.29
SREK1-216ENST00000612404 PDYNP01213 254 aa16.88■□□□□ 0.29
SREK1-216ENST00000612404 PCNAP12004 261 aa16.88■□□□□ 0.29
SREK1-216ENST00000612404 AMD1P17707 334 aa16.88■□□□□ 0.29
SREK1-216ENST00000612404 LAPTM5Q13571 262 aa16.88■□□□□ 0.29
SREK1-216ENST00000612404 DDX39BQ13838 428 aaKnown RBP16.88■□□□□ 0.29
SREK1-216ENST00000612404 LSM12Q3MHD2 195 aaKnown RBP16.88■□□□□ 0.29
SREK1-216ENST00000612404 KIAA1614Q5VZ46 1190 aa16.88■□□□□ 0.29
SREK1-216ENST00000612404 ARMC6Q6NXE6 501 aa16.88■□□□□ 0.29
SREK1-216ENST00000612404 ZCCHC8Q6NZY4 707 aaKnown RBP16.88■□□□□ 0.29
SREK1-216ENST00000612404 MED27Q6P2C8 311 aa16.88■□□□□ 0.29
SREK1-216ENST00000612404 MTDHQ86UE4 582 aaKnown RBP16.88■□□□□ 0.29
SREK1-216ENST00000612404 OR4C6Q8NH72 309 aa16.88■□□□□ 0.29
SREK1-216ENST00000612404 RSC1A1Q92681 617 aa16.88■□□□□ 0.29
SREK1-216ENST00000612404 TUBGCP3Q96CW5 907 aa16.88■□□□□ 0.29
SREK1-216ENST00000612404 CCT7Q99832 543 aa16.88■□□□□ 0.29
SREK1-216ENST00000612404 SPNS1Q9H2V7 528 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms