RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 PCSK9Q8NBP7 692 aaKnown RBP13.64□□□□□ -0.23
COL6A1-207ENST00000612273 OR4K1Q8NGD4 311 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 LGALS12Q96DT0 336 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 SLC32A1Q9H598 525 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 REEP1Q9H902 201 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 WDR70Q9NW82 654 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 THUMPD1Q9NXG2 353 aaKnown RBP13.64□□□□□ -0.23
COL6A1-207ENST00000612273 SLCO3A1Q9UIG8 710 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 ABT1Q9ULW3 272 aaKnown RBP13.64□□□□□ -0.23
COL6A1-207ENST00000612273 TPRKBQ9Y3C4 175 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 SNX8Q9Y5X2 465 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 PCDHGA12O60330 932 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 ERN1O75460 977 aaKnown RBP13.64□□□□□ -0.23
COL6A1-207ENST00000612273 HPRP00739 348 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 FABP3P05413 133 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 POU1F1P28069 291 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 CD70P32970 193 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 HKDC1Q2TB90 917 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 XKR6Q5GH73 641 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 PRSS36Q5K4E3 855 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 NIPAL1Q6NVV3 410 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 NOXRED1Q6NXP6 359 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 NCCRP1Q6ZVX7 275 aaPredicted RBP13.64□□□□□ -0.23
COL6A1-207ENST00000612273 C2orf73Q8N5S3 287 aaPredicted RBP13.64□□□□□ -0.23
COL6A1-207ENST00000612273 CCDC115Q96NT0 180 aa13.64□□□□□ -0.23
COL6A1-207ENST00000612273 GNG14A0A1W2PPG7 69 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 EPN2O95208 641 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 DLGAP3O95886 979 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 DGUOKQ16854 277 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 CCDC71Q8IV32 467 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-207ENST00000612273 CMTM8Q8IZV2 173 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 GLB1L3Q8NCI6 653 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-207ENST00000612273 PJA1Q8NG27 643 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 OR5AK3PQ8NH89 298 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 MCFD2Q8NI22 146 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 SPATA17Q96L03 361 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 KCNH6Q9H252 994 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 FNDC1Q4ZHG4 1894 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-207ENST00000612273 KDELR2P33947 212 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 SPAM1P38567 509 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 CRATP43155 626 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 PPP3CCP48454 512 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 CCSMST1Q4G0I0 132 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 DNAJB7Q7Z6W7 309 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-207ENST00000612273 ZNF366Q8N895 744 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 MTG2Q9H4K7 406 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 TMEM184CQ9NVA4 438 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 RHCGQ9UBD6 479 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 ACSL6Q9UKU0 697 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 TSC22D4Q9Y3Q8 395 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 TMEM202A6NGA9 273 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 MAGEB17A8MXT2 336 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 EFCAB9A8MZ26 197 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 TMEM189-UBE2V1I3L0A0 370 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 ITIH1P19827 911 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 RRM2P31350 389 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 TUFMP49411 452 aaKnown RBP13.63□□□□□ -0.23
COL6A1-207ENST00000612273 CRISP3P54108 245 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 CLDN8P56748 225 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 RPS3AP61247 264 aaKnown RBP13.63□□□□□ -0.23
COL6A1-207ENST00000612273 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.63□□□□□ -0.23
COL6A1-207ENST00000612273 TRIM46Q7Z4K8 759 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 ANKRD13BQ86YJ7 626 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 CHPFQ8IZ52 775 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 Q8N9G6 341 aaPredicted RBP13.63□□□□□ -0.23
COL6A1-207ENST00000612273 DNASE1L2Q92874 299 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 VWA8A3KMH1 1905 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 ANKRD36A6QL64 1941 aa13.63□□□□□ -0.23
COL6A1-207ENST00000612273 SCN4AP35499 1836 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 VCANP13611 3396 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 DICER1Q9UPY3 1922 aaKnown RBP13.62□□□□□ -0.23
COL6A1-207ENST00000612273 H7C0S8 307 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 FZD6O60353 706 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 PQBP1O60828 265 aaKnown RBP13.62□□□□□ -0.23
COL6A1-207ENST00000612273 RETP07949 1114 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 CHRM5P08912 532 aaPredicted RBP13.62□□□□□ -0.23
COL6A1-207ENST00000612273 PREPP48147 710 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 B4GALNT1Q00973 533 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 NAE1Q13564 534 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 ATG9BQ674R7 924 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 RETSATQ6NUM9 610 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 CRTC1Q6UUV9 634 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 POC5Q8NA72 575 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 ST13P5Q8NFI4 369 aaPredicted RBP13.62□□□□□ -0.23
COL6A1-207ENST00000612273 PDLIM5Q96HC4 596 aaKnown RBP13.62□□□□□ -0.23
COL6A1-207ENST00000612273 TRIT1Q9H3H1 467 aaKnown RBP13.62□□□□□ -0.23
COL6A1-207ENST00000612273 RLIMQ9NVW2 624 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 KIAA1522Q9P206 1035 aaPredicted RBP13.62□□□□□ -0.23
COL6A1-207ENST00000612273 SLC6A14Q9UN76 642 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 SNX6Q9UNH7 406 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 H7C4K7 107 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 JRKO75564 520 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 LIPAP38571 399 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 SLC35A2P78381 396 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 ACSM2AQ08AH3 577 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 ABHD18Q0P651 414 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 GANABQ14697 944 aaKnown RBP13.62□□□□□ -0.23
COL6A1-207ENST00000612273 CBX2Q14781 532 aaPredicted RBP13.62□□□□□ -0.23
COL6A1-207ENST00000612273 VMACQ2NL98 169 aa13.62□□□□□ -0.23
COL6A1-207ENST00000612273 FRG2Q64ET8 278 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms