RNA–Protein interactions for RNA: ENST00000611976.1

CDC42EP3-206, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CDC42EP3, Length 5,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-206ENST00000611976 E2F2Q14209 437 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 TCEA2Q15560 299 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 ZNF630Q2M218 657 aaPredicted RBP10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 TPGS2Q68CL5 300 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 GDF6Q6KF10 455 aaPredicted RBP10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 TMEM220Q6QAJ8 160 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 ZNF517Q6ZMY9 492 aaPredicted RBP10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 LINC00471Q8N535 108 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 CNIH3Q8TBE1 160 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 CITED4Q96RK1 184 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 RHBGQ9H310 441 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 PCDHGA10Q9Y5H3 936 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 ST14Q9Y5Y6 855 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 PMF1-BGLAPU3KQ54 211 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 H3BMQ9 156 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 SP3Q02447 781 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 KCNC3Q14003 757 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 CARD16Q5EG05 197 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 NPLOC4Q8TAT6 608 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 ERLEC1Q96DZ1 483 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 COG8Q96MW5 612 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 SLC30A2Q9BRI3 323 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 AGPAT4Q9NRZ5 378 aa10.63□□□□□ -0.71
CDC42EP3-206ENST00000611976 XPNPEP2O43895 674 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 OR5F1O95221 314 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 OR6A2O95222 327 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 GTF2E2P29084 291 aaKnown RBP10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 GGT5P36269 586 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 PRR5P85299 388 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 PLA2G4EQ3MJ16 856 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 CYBRD1Q53TN4 286 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 GALNT13Q8IUC8 556 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 ANKRD49Q8WVL7 239 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 RAD51AP1Q96B01 352 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 TMIGD2Q96BF3 282 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 DMRTB1Q96MA1 342 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 CAMK1GQ96NX5 476 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 FUNDC2Q9BWH2 189 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 ITM2CQ9NQX7 267 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 RIMKLBQ9ULI2 386 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 LRRC14BA6NHZ5 514 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 ISM1B1AKI9 464 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 SLC1A7O00341 560 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 YES1P07947 543 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 CDK4P11802 303 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 ATP1B2P14415 290 aaPredicted RBP10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 ITIH1P19827 911 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 FAUP35544 74 aaKnown RBP10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 ARSDP51689 593 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 NUDT6P53370 316 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 CRISP3P54108 245 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 CDK6Q00534 326 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 PTGR1Q14914 329 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 ZNF311Q5JNZ3 666 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 CXorf57Q6NSI4 855 aaKnown RBP10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 NAT16Q8N8M0 369 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 BRI3BPQ8WY22 251 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 SPATA9Q9BWV2 254 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 LMAN2LQ9H0V9 348 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 NCKAP1Q9Y2A7 1128 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 SPIN1Q9Y657 262 aaPredicted RBP10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 ECM29Q5VYK3 1845 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 MARF1Q9Y4F3 1742 aaKnown RBP10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 TRBC2A0A5B9 178 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 DIRAS1O95057 198 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 GSTM3P21266 225 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 GPX3P22352 226 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 GPR17Q13304 367 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 PTCHD3Q3KNS1 767 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 ZNF367Q7RTV3 350 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 THOC6Q86W42 341 aaKnown RBP10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 OR2AP1Q8NGE2 309 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 RACGAP1Q9H0H5 632 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 TRIT1Q9H3H1 467 aaKnown RBP10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 MARCH7Q9H992 704 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 WDR6Q9NNW5 1121 aaKnown RBP10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 PAK1IP1Q9NWT1 392 aaPredicted RBP10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 PCTPQ9UKL6 214 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 TOGARAM1Q9Y4F4 1720 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 BOLA2-SMG1P6H3BVE0 249 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 CLDN7O95471 211 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 OPN1SWP03999 348 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 ITGB1P05556 798 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 HAPLN1P10915 354 aaPredicted RBP10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 CSTF2P33240 577 aaKnown RBP eCLIP10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 GRM2Q14416 872 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 SMU1Q2TAY7 513 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 ZNF783Q6ZMS7 281 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 MBOAT1Q6ZNC8 495 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 CACUL1Q86Y37 369 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 RGL4Q8IZJ4 473 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 CLDN19Q8N6F1 224 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 CXorf40BQ96DE9 158 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 UCK2Q9BZX2 261 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 GPN1Q9HCN4 374 aaPredicted RBP10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 MAT2BQ9NZL9 334 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 ERVK-18Q9QC07 812 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 SEC14L4Q9UDX3 406 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 SLC27A6Q9Y2P4 619 aa10.62□□□□□ -0.71
CDC42EP3-206ENST00000611976 GPSM3Q9Y4H4 160 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms