RNA–Protein interactions for RNA: ENST00000609587.1

SMCHD1-213, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

Gene SMCHD1, Length 460 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-213ENST00000609587 ST6GALNAC6Q969X2 333 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 ATP6V1E2Q96A05 226 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 PGM2Q96G03 612 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 JAKMIP1Q96N16 626 aaKnown RBP3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 F2RL3Q96RI0 385 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 KRTAP4-3Q9BYR4 195 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 SHARPINQ9H0F6 387 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 INTS10Q9NVR2 710 aaKnown RBP3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 ERAP1Q9NZ08 941 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 ERRFI1Q9UJM3 462 aaPredicted RBP3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 GRID1Q9ULK0 1009 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 NOL7Q9UMY1 257 aaKnown RBP3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 KCNK7Q9Y2U2 307 aa3.85□□□□□ -1.79
SMCHD1-213ENST00000609587 C5orf52A6NGY3 159 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 O00370 1275 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 KLF11O14901 512 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 LINC01565O15544 149 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 PPIP5K2O43314 1243 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 NADKO95544 446 aaPredicted RBP3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 EML2O95834 649 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 STAG3L1P0CL83 205 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 EPORP19235 508 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 LHCGRP22888 699 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 MAGEA11P43364 429 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 NKX2-1P43699 371 aaPredicted RBP3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 TNNT3P45378 269 aaPredicted RBP3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 GMPSP49915 693 aaPredicted RBP3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 TRAP1Q12931 704 aaKnown RBP3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 CDO1Q16878 200 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 TWISTNBQ3B726 338 aaPredicted RBP3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 PDLIM3Q53GG5 364 aaPredicted RBP3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 SPOUT1Q5T280 376 aaKnown RBP3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 LCN1P1Q5VSP4 162 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 LYSMD4Q5XG99 296 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 FAM53AQ6NSI3 398 aaPredicted RBP3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 C15orf39Q6ZRI6 1047 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 G2E3Q7L622 706 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 APLFQ8IW19 511 aaPredicted RBP3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 KLHL7Q8IXQ5 586 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 KIRREL3Q8IZU9 778 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 MARVELD2Q8N4S9 558 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 SEPT1Q8WYJ6 367 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 PYCR2Q96C36 320 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 ZNF501Q96CX3 271 aaPredicted RBP3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 FBXO17Q96EF6 278 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 BSCL2Q96G97 398 aaPredicted RBP3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 MAP3K3Q99759 626 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 FAM49AQ9H0Q0 323 aaPredicted RBP3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 PPANQ9NQ55 473 aaKnown RBP3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 DNAJB9Q9UBS3 223 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 C19orf25Q9UFG5 118 aaPredicted RBP3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 R4GN57 208 aa3.84□□□□□ -1.79
SMCHD1-213ENST00000609587 FAM170AA1A519 330 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 PSMD14O00487 310 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 IFIT3O14879 490 aaKnown RBP3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 EPHB6O15197 1021 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 GRID2O43424 1007 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 PRAF2O60831 178 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 FCGR3BO75015 233 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 GLRA3O75311 464 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 PLGP00747 810 aaPredicted RBP3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 RLN1P04808 185 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 SERPING1P05155 500 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 GPIP06744 558 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 PATE4P0C8F1 98 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 FAM157CP0CG43 387 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 GP1BBP13224 206 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 LBPP18428 481 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 PSMB4P28070 264 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 ALDH4A1P30038 563 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 SOAT1P35610 550 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 CACNG1Q06432 222 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 RBBP7Q16576 425 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 TAZQ16635 292 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 KRT71Q3SY84 523 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 ZNF876PQ49A33 203 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 ZRANB3Q5FWF4 1079 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 FFAR4Q5NUL3 377 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 LCE1FQ5T754 118 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 C1QTNF12Q5T7M4 302 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 SUSD4Q5VX71 490 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 TXNRD3NBQ6F5E7 133 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 UGT3A1Q6NUS8 523 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 NOTUMQ6P988 496 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 CTR9Q6PD62 1173 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 IL17RELQ6ZVW7 336 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 PHLDB2Q86SQ0 1253 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 C4orf19Q8IY42 314 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 KLHDC1Q8N7A1 406 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 NIPA2Q8N8Q9 360 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 OR2T11Q8NH01 316 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 TSACCQ96A04 125 aaPredicted RBP3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 FSD1Q9BTV5 496 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 PITPNM3Q9BZ71 974 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 ACTL8Q9H568 366 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 MINDY3Q9H8M7 445 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 LMAN1LQ9HAT1 526 aa3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 DDX43Q9NXZ2 648 aaKnown RBP3.83□□□□□ -1.8
SMCHD1-213ENST00000609587 PKD2L2Q9NZM6 624 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms