RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 PCDH19Q8TAB3 1148 aa12.77□□□□□ -0.36
USP6NL-205ENST00000609104 GEMIN6Q8WXD5 167 aaKnown RBP12.77□□□□□ -0.36
USP6NL-205ENST00000609104 SCGB3A2Q96PL1 93 aa12.77□□□□□ -0.36
USP6NL-205ENST00000609104 VPS29Q9UBQ0 182 aa12.77□□□□□ -0.36
USP6NL-205ENST00000609104 NIPSNAP2O75323 286 aa12.77□□□□□ -0.36
USP6NL-205ENST00000609104 HMGCS1Q01581 520 aa12.77□□□□□ -0.36
USP6NL-205ENST00000609104 LPIN3Q9BQK8 851 aa12.77□□□□□ -0.36
USP6NL-205ENST00000609104 ZNF358Q9NW07 568 aa12.77□□□□□ -0.36
USP6NL-205ENST00000609104 VNN3Q9NY84 501 aa12.77□□□□□ -0.36
USP6NL-205ENST00000609104 MYO9BQ13459 2157 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 TRAV6A0A075B6T7 132 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 TCRBV7S3A2A0A539 114 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 AP1S1P61966 158 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 LRRC32Q14392 662 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 ZBED5Q49AG3 693 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 TMEM139Q8IV31 216 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 NFKBIDQ8NI38 313 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 CANT1Q8WVQ1 401 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 MROH2AA6NES4 1674 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 OPN1SWP03999 348 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 ZNF8P17098 575 aaPredicted RBP12.77□□□□□ -0.37
USP6NL-205ENST00000609104 PDCD4Q53EL6 469 aaKnown RBP12.77□□□□□ -0.37
USP6NL-205ENST00000609104 C9orf43Q8TAL5 461 aaPredicted RBP12.77□□□□□ -0.37
USP6NL-205ENST00000609104 TMBIM1Q969X1 311 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 PYURFQ96I23 114 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 POFUT2Q9Y2G5 429 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 PCDHGB1Q9Y5G3 927 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 CLCA3PQ9Y6N3 262 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 MYBPHLA2RUH7 354 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 CHRNA4P43681 627 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 SP2Q02086 613 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 JAGN1Q8N5M9 183 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 LRRC57Q8N9N7 239 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 OR10Q1Q8NGQ4 319 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 SLC35F4A4IF30 521 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 C9IYK1 514 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 SCDO00767 359 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 SLC22A2O15244 555 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 FESP07332 822 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 ZNF16P17020 682 aaPredicted RBP12.77□□□□□ -0.37
USP6NL-205ENST00000609104 GJA9P57773 515 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 VARS2Q5ST30 1063 aaKnown RBP12.77□□□□□ -0.37
USP6NL-205ENST00000609104 FUT10Q6P4F1 479 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 PHC2Q8IXK0 858 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 TBL1XR1Q9BZK7 514 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 DTLQ9NZJ0 730 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 GSKIPQ9P0R6 139 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 PPM1HQ9ULR3 514 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 DIRAS1O95057 198 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 RAB36O95755 333 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 PLGP00747 810 aaPredicted RBP12.77□□□□□ -0.37
USP6NL-205ENST00000609104 VAMP1P23763 118 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 CAP1Q01518 475 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 ZNF227Q86WZ6 799 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 HCAR2Q8TDS4 363 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 ZNF226Q9NYT6 803 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 IL36AQ9UHA7 158 aa12.77□□□□□ -0.37
USP6NL-205ENST00000609104 C2CD4BA6NLJ0 364 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 ANXA8P13928 327 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 UGT8Q16880 541 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 AMZ1Q400G9 498 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 PAMR1Q6UXH9 720 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 OTOP2Q7RTS6 562 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 TFAP2BQ92481 460 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 SLC7A6OSQ96CW6 309 aaPredicted RBP12.76□□□□□ -0.37
USP6NL-205ENST00000609104 DEFB118Q96PH6 123 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 TM9SF2Q99805 663 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 NUSAP1Q9BXS6 441 aaKnown RBP12.76□□□□□ -0.37
USP6NL-205ENST00000609104 NARSO43776 548 aaKnown RBP12.76□□□□□ -0.37
USP6NL-205ENST00000609104 KCTD9Q7L273 389 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 RGMAQ96B86 450 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 ACBD6Q9BR61 282 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 C14orf166Q9Y224 244 aaKnown RBP12.76□□□□□ -0.37
USP6NL-205ENST00000609104 PRORSD1PA6NEY8 169 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 KHNYNO15037 678 aaKnown RBP12.76□□□□□ -0.37
USP6NL-205ENST00000609104 DGKQP52824 942 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 LILRA4P59901 499 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 PAQR3Q6TCH7 311 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 OR5M3Q8NGP4 307 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 NEMP2A6NFY4 417 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 J3QRK9 145 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 TBX10O75333 385 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 HMBOX1Q6NT76 420 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 OR13C4Q8NGS5 318 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 FBXL8Q96CD0 374 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 ZNF285Q96NJ3 590 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 DPYSL5Q9BPU6 564 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 RNF38Q9H0F5 515 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 CACNG4Q9UBN1 327 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 TIMM8BQ9Y5J9 83 aaPredicted RBP12.76□□□□□ -0.37
USP6NL-205ENST00000609104 STATHP02808 62 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 PVALBP20472 110 aaPredicted RBP12.76□□□□□ -0.37
USP6NL-205ENST00000609104 SLC15A1P46059 708 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 OR8S1Q8NH09 359 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 DNAJB8Q8NHS0 232 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 STOML3Q8TAV4 291 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 PLD4Q96BZ4 506 aa12.76□□□□□ -0.37
USP6NL-205ENST00000609104 TFB2MQ9H5Q4 396 aaKnown RBP12.76□□□□□ -0.37
USP6NL-205ENST00000609104 MTMR10Q9NXD2 777 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms