RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 MAP2K3P46734 347 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 CDH8P55286 799 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 EMX2Q04743 252 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 ZNF91Q05481 1191 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 RUNX1T1Q06455 604 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 CCDC85BQ15834 202 aaPredicted RBP12.23□□□□□ -0.45
CTCFL-218ENST00000608440 HSD17B12Q53GQ0 312 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 CAPN13Q6MZZ7 669 aaPredicted RBP12.23□□□□□ -0.45
CTCFL-218ENST00000608440 ZSWIM9Q86XI8 627 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 PGBD5Q8N414 524 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 PNPLA1Q8N8W4 532 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 TWIST2Q8WVJ9 160 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 IPCEF1Q8WWN9 437 aaPredicted RBP12.23□□□□□ -0.45
CTCFL-218ENST00000608440 FCGR1BQ92637 280 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 RBM14Q96PK6 669 aaKnown RBP12.23□□□□□ -0.45
CTCFL-218ENST00000608440 HAPLN2Q9GZV7 340 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 KCTD5Q9NXV2 234 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 KCMF1Q9P0J7 381 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 FKBP7Q9Y680 259 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 LOC102723532A0A0G2JNH3 316 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 C2CD4BA6NLJ0 364 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 HPGDSO60760 199 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 TRIM3O75382 744 aaPredicted RBP12.23□□□□□ -0.45
CTCFL-218ENST00000608440 VIPP01282 170 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 STSP08842 583 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 EFNA1P20827 205 aaPredicted RBP12.23□□□□□ -0.45
CTCFL-218ENST00000608440 ICAM3P32942 547 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 DAPP51397 102 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 SH3BP2P78314 561 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 PUDPQ08623 228 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 FCN2Q15485 313 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 RFX4Q33E94 735 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 Q3ZCU0 254 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 SCIMPQ6UWF3 145 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 B3GNT9Q6UX72 402 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 SLC26A9Q7LBE3 791 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 TAS1R3Q7RTX0 852 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 RNF180Q86T96 592 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 LRRTM3Q86VH5 581 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 ZFPM2Q8WW38 1151 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 FAM162AQ96A26 154 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 SGK3Q96BR1 496 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 DIRAS2Q96HU8 199 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 SORCS2Q96PQ0 1159 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 ASPNQ9BXN1 380 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 C3orf14Q9HBI5 128 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 UBP1Q9NZI7 540 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 SPATA2Q9UM82 520 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 PLCL2Q9UPR0 1127 aa12.23□□□□□ -0.45
CTCFL-218ENST00000608440 M0QYV0 167 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 CBX4O00257 560 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 WDPCPO95876 746 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 LBPP18428 481 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 GGT1P19440 569 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 MAN2A2P49641 1150 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 CSRP3P50461 194 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 HERVK_113P63132 956 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 ELP6Q0PNE2 266 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 MED22Q15528 200 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 TSTQ16762 297 aaKnown RBP12.22□□□□□ -0.45
CTCFL-218ENST00000608440 FRMPD2BQ6IN97 320 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 Q6ZPB1 254 aaPredicted RBP12.22□□□□□ -0.45
CTCFL-218ENST00000608440 ZNF567Q8N184 647 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 MS4A15Q8N5U1 240 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 ARRDC4Q8NCT1 418 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 C3orf58Q8NDZ4 430 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 UTP15Q8TED0 518 aaKnown RBP12.22□□□□□ -0.45
CTCFL-218ENST00000608440 COPS5Q92905 334 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 SERPINB11Q96P15 392 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 RTP3Q9BQQ7 232 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 RBCK1Q9BYM8 510 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 MID1IP1Q9NPA3 183 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 ACTR10Q9NZ32 417 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 MALT1Q9UDY8 824 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 LEF1Q9UJU2 399 aaPredicted RBP12.22□□□□□ -0.45
CTCFL-218ENST00000608440 A0A075B6Q4 140 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 TCRBV16S1A1N1A0A5B0 115 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 SMIM30A4D0T7 59 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 LRRC14BA6NHZ5 514 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 C19orf81C9J6K1 198 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 ST8SIA5O15466 376 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 CELF2O95319 508 aaKnown RBP12.22□□□□□ -0.45
CTCFL-218ENST00000608440 MATN4O95460 622 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 PSPHP78330 225 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 CSTF1Q05048 431 aaKnown RBP12.22□□□□□ -0.45
CTCFL-218ENST00000608440 PLD1Q13393 1074 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 SNAPC1Q16533 368 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 COL28A1Q2UY09 1125 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 SPATS1Q496A3 300 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 FBXO43Q4G163 708 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 RTL4Q6ZR62 310 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 CEP68Q76N32 757 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 ADGRD2Q7Z7M1 963 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 APH1BQ8WW43 257 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 C12orf42Q96LP6 360 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 RPRD1AQ96P16 312 aaPredicted RBP12.22□□□□□ -0.45
CTCFL-218ENST00000608440 SIGLEC11Q96RL6 698 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 ZNF670Q9BS34 389 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 TTPALQ9BTX7 342 aa12.22□□□□□ -0.45
CTCFL-218ENST00000608440 GPR63Q9BZJ6 419 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms