RNA–Protein interactions for RNA: ENST00000601912.5

VRK3-225, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,668 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-225ENST00000601912 MNAT1P51948 309 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 MAD2L1Q13257 205 aaPredicted RBP17.36■□□□□ 0.37
VRK3-225ENST00000601912 SLBPQ14493 270 aaKnown RBP eCLIP17.36■□□□□ 0.37
VRK3-225ENST00000601912 KIF19Q2TAC6 998 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 SMU1Q2TAY7 513 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 AP5B1Q2VPB7 878 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 ICE2Q659A1 982 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 RBM12BQ8IXT5 1001 aaKnown RBP17.36■□□□□ 0.37
VRK3-225ENST00000601912 NAGSQ8N159 534 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 AVL9Q8NBF6 648 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 WDR20Q8TBZ3 569 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 GEMIN8Q9NWZ8 242 aaKnown RBP17.36■□□□□ 0.37
VRK3-225ENST00000601912 CCL27Q9Y4X3 112 aa17.36■□□□□ 0.37
VRK3-225ENST00000601912 ARHGEF17Q96PE2 2063 aaPredicted RBP17.35■□□□□ 0.37
VRK3-225ENST00000601912 TDRD6O60522 2096 aaKnown RBP17.35■□□□□ 0.37
VRK3-225ENST00000601912 CCNDBP1O95273 360 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 ALDOCP09972 364 aaKnown RBP17.35■□□□□ 0.37
VRK3-225ENST00000601912 PCNAP12004 261 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 HSD3B1P14060 373 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 HSD3B2P26439 372 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 PIK3R1P27986 724 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 CNR2P34972 360 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 CCR8P51685 355 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 UBE2IP63279 158 aaKnown RBP17.35■□□□□ 0.37
VRK3-225ENST00000601912 ABATP80404 500 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 HMGCS1Q01581 520 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 EMX2Q04743 252 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 PRDX1Q06830 199 aaKnown RBP17.35■□□□□ 0.37
VRK3-225ENST00000601912 CSTF3Q12996 717 aaKnown RBP17.35■□□□□ 0.37
VRK3-225ENST00000601912 NAA25Q14CX7 972 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 PLK5Q496M5 336 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 FBXL6Q8N531 539 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 ABHD11Q8NFV4 315 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 OR7G3Q8NG95 312 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 SLC37A2Q8TED4 501 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 SLC22A18Q96BI1 424 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 AIF1LQ9BQI0 150 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 ACPTQ9BZG2 426 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 ERVMER34-1Q9H9K5 563 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 LRTM1Q9HBL6 345 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 ZDBF2Q9HCK1 2354 aa17.35■□□□□ 0.37
VRK3-225ENST00000601912 A0A1B0GVT2 93 aa17.34■□□□□ 0.37
VRK3-225ENST00000601912 PIPSLA2A3N6 862 aa17.34■□□□□ 0.37
VRK3-225ENST00000601912 B4DGG1 531 aa17.34■□□□□ 0.37
VRK3-225ENST00000601912 PSMD12O00232 456 aaPredicted RBP17.34■□□□□ 0.37
VRK3-225ENST00000601912 AQP9O43315 295 aa17.34■□□□□ 0.37
VRK3-225ENST00000601912 RSL1D1O76021 490 aaKnown RBP17.34■□□□□ 0.37
VRK3-225ENST00000601912 THRAP10827 490 aa17.34■□□□□ 0.37
VRK3-225ENST00000601912 PSMB5P28074 263 aa17.34■□□□□ 0.37
VRK3-225ENST00000601912 PHEXP78562 749 aa17.34■□□□□ 0.37
VRK3-225ENST00000601912 GPR18Q14330 331 aa17.34■□□□□ 0.37
VRK3-225ENST00000601912 CEP68Q76N32 757 aa17.34■□□□□ 0.37
VRK3-225ENST00000601912 MIER2Q8N344 545 aa17.34■□□□□ 0.37
VRK3-225ENST00000601912 OR2A1Q8NGT9 310 aa17.34■□□□□ 0.37
VRK3-225ENST00000601912 PATE1Q8WXA2 126 aa17.34■□□□□ 0.37
VRK3-225ENST00000601912 JPH3Q8WXH2 748 aaPredicted RBP17.34■□□□□ 0.37
VRK3-225ENST00000601912 PITHD1Q9GZP4 211 aaPredicted RBP17.34■□□□□ 0.37
VRK3-225ENST00000601912 BRF2Q9HAW0 419 aa17.34■□□□□ 0.37
VRK3-225ENST00000601912 C1orf109Q9NX04 203 aa17.34■□□□□ 0.37
VRK3-225ENST00000601912 NOP53Q9NZM5 478 aaKnown RBP17.34■□□□□ 0.37
VRK3-225ENST00000601912 EIF3LQ9Y262 564 aaKnown RBP17.34■□□□□ 0.37
VRK3-225ENST00000601912 ISM1B1AKI9 464 aa17.33■□□□□ 0.37
VRK3-225ENST00000601912 YY2O15391 372 aa17.33■□□□□ 0.37
VRK3-225ENST00000601912 HRO43593 1189 aa17.33■□□□□ 0.37
VRK3-225ENST00000601912 SEC22BO75396 215 aa17.33■□□□□ 0.37
VRK3-225ENST00000601912 ANXA6P08133 673 aa17.33■□□□□ 0.37
VRK3-225ENST00000601912 CHRM5P08912 532 aaPredicted RBP17.33■□□□□ 0.37
VRK3-225ENST00000601912 NCALDP61601 193 aa17.33■□□□□ 0.37
VRK3-225ENST00000601912 GRIK2Q13002 908 aa17.33■□□□□ 0.37
VRK3-225ENST00000601912 DDX39BQ13838 428 aaKnown RBP17.33■□□□□ 0.37
VRK3-225ENST00000601912 MAPRE2Q15555 327 aa17.33■□□□□ 0.37
VRK3-225ENST00000601912 SF1Q15637 639 aaKnown RBP17.33■□□□□ 0.37
VRK3-225ENST00000601912 TMIGD1Q6UXZ0 262 aa17.33■□□□□ 0.37
VRK3-225ENST00000601912 FAM129CQ86XR2 697 aa17.33■□□□□ 0.37
VRK3-225ENST00000601912 PARP9Q8IXQ6 854 aa17.33■□□□□ 0.37
VRK3-225ENST00000601912 LAS2Q8IYD9 372 aa17.33■□□□□ 0.37
VRK3-225ENST00000601912 ZNF548Q8NEK5 533 aaPredicted RBP17.33■□□□□ 0.37
VRK3-225ENST00000601912 RP9Q8TA86 221 aaKnown RBP17.33■□□□□ 0.37
VRK3-225ENST00000601912 MTERF1Q99551 399 aaKnown RBP17.33■□□□□ 0.37
VRK3-225ENST00000601912 MRPS30Q9NP92 439 aaKnown RBP17.33■□□□□ 0.37
VRK3-225ENST00000601912 LOC100653049A0A140TA62 436 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 FAM221BA6H8Z2 402 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 ANKRD65E5RJM6 399 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 LMO7DNF2Z398 122 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 H7BY64 318 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 PRICKLE3O43900 615 aaPredicted RBP17.32■□□□□ 0.36
VRK3-225ENST00000601912 KRT34O76011 436 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 COX4I1P13073 169 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 PRPH2P23942 346 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 HRH2P25021 359 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 CMPK1P30085 196 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 ACADVLP49748 655 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 RPL38P63173 70 aaKnown RBP17.32■□□□□ 0.36
VRK3-225ENST00000601912 HHEXQ03014 270 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 CYLC2Q14093 348 aaPredicted RBP17.32■□□□□ 0.36
VRK3-225ENST00000601912 KIR2DS3Q14952 304 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 HERC3Q15034 1050 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 RFTN2Q52LD8 501 aaPredicted RBP17.32■□□□□ 0.36
VRK3-225ENST00000601912 BMP8AQ7Z5Y6 402 aa17.32■□□□□ 0.36
VRK3-225ENST00000601912 ZFAND4Q86XD8 727 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms