RNA–Protein interactions for RNA: ENST00000600927.1

ZNF548-211, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-211ENST00000600927 NXNQ6DKJ4 435 aa11.16□□□□□ -0.62
ZNF548-211ENST00000600927 OGFOD3Q6PK18 319 aa11.16□□□□□ -0.62
ZNF548-211ENST00000600927 C17orf82Q86X59 251 aaPredicted RBP11.16□□□□□ -0.62
ZNF548-211ENST00000600927 NRROSQ86YC3 692 aa11.16□□□□□ -0.62
ZNF548-211ENST00000600927 TREML1Q86YW5 311 aa11.16□□□□□ -0.62
ZNF548-211ENST00000600927 GALNT13Q8IUC8 556 aa11.16□□□□□ -0.62
ZNF548-211ENST00000600927 ARL10Q8N8L6 244 aa11.16□□□□□ -0.62
ZNF548-211ENST00000600927 KDF1Q8NAX2 398 aaPredicted RBP11.16□□□□□ -0.62
ZNF548-211ENST00000600927 GPR156Q8NFN8 814 aa11.16□□□□□ -0.62
ZNF548-211ENST00000600927 OR56A3Q8NH54 315 aa11.16□□□□□ -0.62
ZNF548-211ENST00000600927 METTL6Q8TCB7 284 aa11.16□□□□□ -0.62
ZNF548-211ENST00000600927 AGR3Q8TD06 166 aa11.16□□□□□ -0.62
ZNF548-211ENST00000600927 GPBAR1Q8TDU6 330 aa11.16□□□□□ -0.62
ZNF548-211ENST00000600927 SKA2Q8WVK7 121 aaPredicted RBP11.16□□□□□ -0.62
ZNF548-211ENST00000600927 RAD51AP1Q96B01 352 aa11.16□□□□□ -0.62
ZNF548-211ENST00000600927 METTL2AQ96IZ6 378 aaKnown RBP11.16□□□□□ -0.62
ZNF548-211ENST00000600927 SHCBP1LQ9BZQ2 653 aa11.16□□□□□ -0.62
ZNF548-211ENST00000600927 OR52A5Q9H2C5 316 aa11.16□□□□□ -0.62
ZNF548-211ENST00000600927 TNFRSF12AQ9NP84 129 aa11.16□□□□□ -0.62
ZNF548-211ENST00000600927 DNAJC11Q9NVH1 559 aa11.16□□□□□ -0.62
ZNF548-211ENST00000600927 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.16□□□□□ -0.62
ZNF548-211ENST00000600927 TRNAU1APQ9NX07 287 aaKnown RBP11.16□□□□□ -0.62
ZNF548-211ENST00000600927 NDE1Q9NXR1 346 aa11.16□□□□□ -0.62
ZNF548-211ENST00000600927 TAS2R1Q9NYW7 299 aa11.16□□□□□ -0.62
ZNF548-211ENST00000600927 MAP1BP46821 2468 aaKnown RBP11.16□□□□□ -0.62
ZNF548-211ENST00000600927 TDRD6O60522 2096 aaKnown RBP11.15□□□□□ -0.62
ZNF548-211ENST00000600927 DYTNA2CJ06 578 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 TMEM8BA6NDV4 472 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 ARHGEF33A8MVX0 844 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 TMEM233B4DJY2 109 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 E9PBE3 544 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 SLC28A1O00337 649 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 PPP6CO00743 305 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 GYG2O15488 501 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 NOBOXO60393 691 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 KLHL41O60662 606 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 OR4F21O95013 312 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 CBX6O95503 412 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 KRT6AP02538 564 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 KRT6BP04259 564 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 PROS1P07225 676 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 HMOX2P30519 316 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 KRT6CP48668 564 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 DUSP3P51452 185 aaPredicted RBP11.15□□□□□ -0.62
ZNF548-211ENST00000600927 PNLIPRP1P54315 467 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 CLDN6P56747 220 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 DAB2P98082 770 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 ABRQ12979 859 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 STX5Q13190 355 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 MAD2L1Q13257 205 aaPredicted RBP11.15□□□□□ -0.62
ZNF548-211ENST00000600927 NR0B2Q15466 257 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 PTCHD3Q3KNS1 767 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 HES3Q5TGS1 186 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 CLEC6AQ6EIG7 209 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 GUSBP11Q6P575 273 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 RPS27LQ71UM5 84 aaKnown RBP11.15□□□□□ -0.62
ZNF548-211ENST00000600927 TRIM46Q7Z4K8 759 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 PDZD3Q86UT5 571 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 GKN2Q86XP6 184 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 SPNS2Q8IVW8 549 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 DCBLD1Q8N8Z6 715 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 KYQ8NBH2 561 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 OR4F6Q8NGB9 312 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 OR9A1PQ8NGU1 263 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 CCL4L1Q8NHW4 92 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 IFI44Q8TCB0 444 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 TMEM168Q9H0V1 697 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 AKTIPQ9H8T0 292 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 ACSS2Q9NR19 701 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 ARMCX1Q9P291 453 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 DKK4Q9UBT3 224 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 SUFUQ9UMX1 484 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 PCYT1BQ9Y5K3 369 aaPredicted RBP11.15□□□□□ -0.62
ZNF548-211ENST00000600927 DMXL2Q8TDJ6 3036 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 CELSR3Q9NYQ7 3312 aa11.15□□□□□ -0.62
ZNF548-211ENST00000600927 PRR19A6NJB7 356 aa11.14□□□□□ -0.63
ZNF548-211ENST00000600927 B2RBV5 119 aa11.14□□□□□ -0.63
ZNF548-211ENST00000600927 IFRD1O00458 451 aaPredicted RBP11.14□□□□□ -0.63
ZNF548-211ENST00000600927 PIP5K1BO14986 540 aa11.14□□□□□ -0.63
ZNF548-211ENST00000600927 GSC2O15499 205 aa11.14□□□□□ -0.63
ZNF548-211ENST00000600927 ULK1O75385 1050 aa11.14□□□□□ -0.63
ZNF548-211ENST00000600927 SKAP2O75563 359 aaPredicted RBP11.14□□□□□ -0.63
ZNF548-211ENST00000600927 RASSF9O75901 435 aa11.14□□□□□ -0.63
ZNF548-211ENST00000600927 JUNP05412 331 aaKnown RBP11.14□□□□□ -0.63
ZNF548-211ENST00000600927 CAPN1P07384 714 aa11.14□□□□□ -0.63
ZNF548-211ENST00000600927 COX4I1P13073 169 aa11.14□□□□□ -0.63
ZNF548-211ENST00000600927 CTSEP14091 401 aa11.14□□□□□ -0.63
ZNF548-211ENST00000600927 IDO1P14902 403 aa11.14□□□□□ -0.63
ZNF548-211ENST00000600927 ACPPP15309 386 aa11.14□□□□□ -0.63
ZNF548-211ENST00000600927 TSPAN8P19075 237 aa11.14□□□□□ -0.63
ZNF548-211ENST00000600927 PIK3R1P27986 724 aa11.14□□□□□ -0.63
ZNF548-211ENST00000600927 PDHA2P29803 388 aa11.14□□□□□ -0.63
ZNF548-211ENST00000600927 HNF4AP41235 474 aa11.14□□□□□ -0.63
ZNF548-211ENST00000600927 FOXA1P55317 472 aa11.14□□□□□ -0.63
ZNF548-211ENST00000600927 STX1BP61266 288 aa11.14□□□□□ -0.63
ZNF548-211ENST00000600927 E2F1Q01094 437 aa11.14□□□□□ -0.63
ZNF548-211ENST00000600927 RIPK1Q13546 671 aa11.14□□□□□ -0.63
ZNF548-211ENST00000600927 CYLC2Q14093 348 aaPredicted RBP11.14□□□□□ -0.63
ZNF548-211ENST00000600927 UBAP2LQ14157 1087 aaKnown RBP11.14□□□□□ -0.63
ZNF548-211ENST00000600927 PYCR3Q53H96 274 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms