RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 TC2NQ8N9U0 490 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 OR52K1Q8NGK4 314 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 OR4L1Q8NH43 312 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 THAP3Q8WTV1 239 aaPredicted RBP5.8□□□□□ -1.48
VRK3-220ENST00000600259 RAD51AP1Q96B01 352 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 MTFMTQ96DP5 389 aaKnown RBP5.8□□□□□ -1.48
VRK3-220ENST00000600259 C14orf79Q96F83 325 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 MAGEB10Q96LZ2 347 aaPredicted RBP5.8□□□□□ -1.48
VRK3-220ENST00000600259 OR2A5Q96R48 311 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 NPAS2Q99743 824 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 SPOCK3Q9BQ16 436 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 FERMT1Q9BQL6 677 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 P2RY12Q9H244 342 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 STMN3Q9NZ72 180 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 SUCOQ9UBS9 1254 aaKnown RBP5.8□□□□□ -1.48
VRK3-220ENST00000600259 TINAGQ9UJW2 476 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 ITGB1BP2Q9UKP3 347 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 R3HDM2Q9Y2K5 976 aaKnown RBP5.8□□□□□ -1.48
VRK3-220ENST00000600259 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.8□□□□□ -1.48
VRK3-220ENST00000600259 PCDHGB6Q9Y5F9 930 aa5.8□□□□□ -1.48
VRK3-220ENST00000600259 ASPDHA6ND91 283 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 OR5H15A6NDH6 313 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 AKR1B15C9JRZ8 316 aaPredicted RBP5.79□□□□□ -1.48
VRK3-220ENST00000600259 PRMT5O14744 637 aaPredicted RBP5.79□□□□□ -1.48
VRK3-220ENST00000600259 WFS1O76024 890 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 STK10O94804 968 aaKnown RBP5.79□□□□□ -1.48
VRK3-220ENST00000600259 TJP3O95049 919 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 MATN4O95460 622 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 RPN2P04844 631 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 EIF2S1P05198 315 aaKnown RBP5.79□□□□□ -1.48
VRK3-220ENST00000600259 APOA4P06727 396 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 FBLP22087 321 aaKnown RBP5.79□□□□□ -1.48
VRK3-220ENST00000600259 ADRA1DP25100 572 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 SSTR2P30874 369 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 RWDD2BP57060 319 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 RELAQ04206 551 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 EEF1A2Q05639 463 aaKnown RBP5.79□□□□□ -1.48
VRK3-220ENST00000600259 SYT16Q17RD7 645 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 HKDC1Q2TB90 917 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 SYTL3Q4VX76 610 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 CCDC181Q5TID7 509 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 FAAH2Q6GMR7 532 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 HIBCHQ6NVY1 386 aaPredicted RBP5.79□□□□□ -1.48
VRK3-220ENST00000600259 LRRC8BQ6P9F7 803 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 CNSTQ6PJW8 725 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 AFTPHQ6ULP2 937 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 NCCRP1Q6ZVX7 275 aaPredicted RBP5.79□□□□□ -1.48
VRK3-220ENST00000600259 FGD2Q7Z6J4 655 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 PAQR7Q86WK9 346 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 SPPL2CQ8IUH8 684 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 SPNS2Q8IVW8 549 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 SIAH3Q8IW03 269 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 ZC3H7AQ8IWR0 971 aaKnown RBP5.79□□□□□ -1.48
VRK3-220ENST00000600259 MDS2Q8NDY4 140 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 MVB12AQ96EY5 273 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 GPR137Q96N19 417 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 BIRC8Q96P09 236 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 SIGLEC12Q96PQ1 595 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 DMRTA2Q96SC8 542 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 CYTH2Q99418 400 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 ZFYVE21Q9BQ24 234 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 PLCD4Q9BRC7 762 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 TMEM121Q9BTD3 319 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 DPH7Q9BTV6 452 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.79□□□□□ -1.48
VRK3-220ENST00000600259 ETNK1Q9HBU6 452 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 MKKSQ9NPJ1 570 aaPredicted RBP5.79□□□□□ -1.48
VRK3-220ENST00000600259 RIC8BQ9NVN3 520 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 GALPQ9UBC7 116 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 TRPC4Q9UBN4 977 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 SLC39A10Q9ULF5 831 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 TTC7AQ9ULT0 858 aaPredicted RBP5.79□□□□□ -1.48
VRK3-220ENST00000600259 CDC14AQ9UNH5 594 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 RUVBL2Q9Y230 463 aaKnown RBP5.79□□□□□ -1.48
VRK3-220ENST00000600259 RUVBL1Q9Y265 456 aaKnown RBP5.79□□□□□ -1.48
VRK3-220ENST00000600259 MEMO1Q9Y316 297 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 REXO2Q9Y3B8 237 aaKnown RBP5.79□□□□□ -1.48
VRK3-220ENST00000600259 HRH3Q9Y5N1 445 aa5.79□□□□□ -1.48
VRK3-220ENST00000600259 ANKHD1Q8IWZ3 2542 aaKnown RBP5.79□□□□□ -1.48
VRK3-220ENST00000600259 ACANP16112 2415 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 A0A0A6YYC8 382 aaPredicted RBP5.78□□□□□ -1.48
VRK3-220ENST00000600259 IGHV3-20A0A0C4DH32 117 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 GRID2IPA4D2P6 1211 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 OR2W5A6NFC9 320 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 BTNL10A8MVZ5 291 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 I3L1I5 382 aaPredicted RBP5.78□□□□□ -1.48
VRK3-220ENST00000600259 P2RX6O15547 441 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 ZNHIT1O43257 154 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 CBFA2T2O43439 604 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 MAN1A2O60476 641 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 ZNF189O75820 626 aaPredicted RBP5.78□□□□□ -1.48
VRK3-220ENST00000600259 CLDN14O95500 239 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 TPM3P06753 285 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 HEXBP07686 556 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 ICAM2P13598 275 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 IGFBP2P18065 325 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 RPS3P23396 243 aaKnown RBP eCLIP5.78□□□□□ -1.48
VRK3-220ENST00000600259 CXCR2P25025 360 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 ARNTP27540 789 aa5.78□□□□□ -1.48
VRK3-220ENST00000600259 CD96P40200 585 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms