RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 GSTM1P09488 218 aa12.26□□□□□ -0.45
UPF1-208ENST00000600012 ANKRD34CP0C6C1 535 aa12.26□□□□□ -0.45
UPF1-208ENST00000600012 GPR89BP0CG08 455 aa12.26□□□□□ -0.45
UPF1-208ENST00000600012 PRKAR1AP10644 381 aa12.26□□□□□ -0.45
UPF1-208ENST00000600012 NCF1P14598 390 aaPredicted RBP12.26□□□□□ -0.45
UPF1-208ENST00000600012 ATP5F1P24539 256 aaPredicted RBP12.26□□□□□ -0.45
UPF1-208ENST00000600012 MAPK9P45984 424 aa12.26□□□□□ -0.45
UPF1-208ENST00000600012 SEC24CP53992 1094 aa12.26□□□□□ -0.45
UPF1-208ENST00000600012 GSTM4Q03013 218 aa12.26□□□□□ -0.45
UPF1-208ENST00000600012 SRSF1Q07955 248 aaKnown RBP eCLIP12.26□□□□□ -0.454e-11■■□□□ 13.4
UPF1-208ENST00000600012 CRTC2Q53ET0 693 aaPredicted RBP12.26□□□□□ -0.45
UPF1-208ENST00000600012 FAM47EQ6ZV65 393 aa12.26□□□□□ -0.45
UPF1-208ENST00000600012 FRA10AC1Q70Z53 315 aa12.26□□□□□ -0.45
UPF1-208ENST00000600012 TIPARPQ7Z3E1 657 aaKnown RBP12.26□□□□□ -0.45
UPF1-208ENST00000600012 ADAMTSL2Q86TH1 951 aa12.26□□□□□ -0.45
UPF1-208ENST00000600012 AMZ2Q86W34 360 aa12.26□□□□□ -0.45
UPF1-208ENST00000600012 GPSM1Q86YR5 675 aa12.26□□□□□ -0.45
UPF1-208ENST00000600012 PLXDC1Q8IUK5 500 aa12.26□□□□□ -0.45
UPF1-208ENST00000600012 LRRC34Q8IZ02 419 aa12.26□□□□□ -0.45
UPF1-208ENST00000600012 SLC22A15Q8IZD6 547 aa12.26□□□□□ -0.45
UPF1-208ENST00000600012 ESX1Q8N693 406 aa12.26□□□□□ -0.45
UPF1-208ENST00000600012 MOCOSQ96EN8 888 aa12.26□□□□□ -0.45
UPF1-208ENST00000600012 MANSC1Q9H8J5 431 aa12.26□□□□□ -0.45
UPF1-208ENST00000600012 MN1Q10571 1320 aaPredicted RBP12.26□□□□□ -0.45
UPF1-208ENST00000600012 C17orf113A0A1B0GUU1 675 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 POLR1CO15160 346 aaPredicted RBP12.25□□□□□ -0.45
UPF1-208ENST00000600012 SNX2O60749 519 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 DLGAP3O95886 979 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 VIMP08670 466 aaKnown RBP12.25□□□□□ -0.45
UPF1-208ENST00000600012 MTHFD2P13995 350 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 GFAPP14136 432 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 BDKRB1P46663 353 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 CLCNKAP51800 687 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 BST1Q10588 318 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 ABRQ12979 859 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 MAP7Q14244 749 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 PHKG1Q16816 387 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 PPP1R3AQ16821 1122 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 FBXO48Q5FWF7 155 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 LIPMQ5VYY2 423 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 NEK10Q6ZWH5 1172 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 UBE2R2Q712K3 238 aaPredicted RBP12.25□□□□□ -0.45
UPF1-208ENST00000600012 TRIM42Q8IWZ5 723 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 PTGR2Q8N8N7 351 aaPredicted RBP12.25□□□□□ -0.45
UPF1-208ENST00000600012 CFAP61Q8NHU2 1237 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 APOBEC4Q8WW27 367 aaKnown RBP12.25□□□□□ -0.45
UPF1-208ENST00000600012 STARD8Q92502 1023 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 DLG3Q92796 817 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 PHF21BQ96EK2 531 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 TMEM237Q96Q45 408 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 TIMM29Q9BSF4 260 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 GATA5Q9BWX5 397 aaPredicted RBP12.25□□□□□ -0.45
UPF1-208ENST00000600012 OSGEPL1Q9H4B0 414 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 APMAPQ9HDC9 416 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 SLCO1B3Q9NPD5 702 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 KLC4Q9NSK0 619 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 OXSMQ9NWU1 459 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 CD274Q9NZQ7 290 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 CPNE7Q9UBL6 633 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 KLHL3Q9UH77 587 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 OARD1Q9Y530 152 aa12.25□□□□□ -0.45
UPF1-208ENST00000600012 DNMT3AQ9Y6K1 912 aaPredicted RBP12.25□□□□□ -0.45
UPF1-208ENST00000600012 KRT87PA6NCN2 255 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 LRRC14BA6NHZ5 514 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 SYCE1LA8MT33 242 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 TRIM13O60858 407 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 LYPLA1O75608 230 aaPredicted RBP12.24□□□□□ -0.45
UPF1-208ENST00000600012 GUCA1CO95843 209 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 SERPINE1P05121 402 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 TPBGLP0DKB5 382 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 TCN2P20062 427 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 STAT5AP42229 794 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 UBE2IP63279 158 aaKnown RBP12.24□□□□□ -0.45
UPF1-208ENST00000600012 FOXK1P85037 733 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 STX3Q13277 289 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 FLNCQ14315 2725 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 TGFBIQ15582 683 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 PFKFB4Q16877 469 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 MBOAT1Q6ZNC8 495 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 RGS9BPQ6ZS82 235 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 RPS27LQ71UM5 84 aaKnown RBP12.24□□□□□ -0.45
UPF1-208ENST00000600012 SREK1Q8WXA9 508 aaKnown RBP12.24□□□□□ -0.45
UPF1-208ENST00000600012 ZNF317Q96PQ6 595 aaPredicted RBP12.24□□□□□ -0.45
UPF1-208ENST00000600012 TBC1D10AQ9BXI6 508 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 FAM107BQ9H098 131 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 WWP1Q9H0M0 922 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 OR52A5Q9H2C5 316 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 ZNF395Q9H8N7 513 aaPredicted RBP12.24□□□□□ -0.45
UPF1-208ENST00000600012 UCK1Q9HA47 277 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 ZNF71Q9NQZ8 489 aaPredicted RBP12.24□□□□□ -0.45
UPF1-208ENST00000600012 FGFR1OP2Q9NVK5 253 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 SIDT1Q9NXL6 827 aaKnown RBP12.24□□□□□ -0.45
UPF1-208ENST00000600012 NUDT4Q9NZJ9 180 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 ANKMY1Q9P2S6 941 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 PSMD13Q9UNM6 376 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 PDE10AQ9Y233 779 aa12.24□□□□□ -0.45
UPF1-208ENST00000600012 GMNCA6NCL1 334 aa12.23□□□□□ -0.45
UPF1-208ENST00000600012 ARHGEF33A8MVX0 844 aa12.23□□□□□ -0.45
UPF1-208ENST00000600012 KLF11O14901 512 aa12.23□□□□□ -0.45
UPF1-208ENST00000600012 TOX3O15405 576 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms