RNA–Protein interactions for RNA: ENST00000598471.1

UPF1-206, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-206ENST00000598471 OR2A1Q8NGT9 310 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 OR4C6Q8NH72 309 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 C19orf60Q96EN9 201 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 RILPQ96NA2 401 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 AIF1LQ9BQI0 150 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 ELOVL6Q9H5J4 265 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 MEAF6Q9HAF1 191 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 PRM3Q9NNZ6 103 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 MRPS30Q9NP92 439 aaKnown RBP14.9□□□□□ -0.02
UPF1-206ENST00000598471 RIC8BQ9NVN3 520 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 PCDHGA11Q9Y5H2 935 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 DNAJC15Q9Y5T4 150 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 CACNA1EQ15878 2313 aa14.9□□□□□ -0.02
UPF1-206ENST00000598471 TDRD6O60522 2096 aaKnown RBP14.89□□□□□ -0.03
UPF1-206ENST00000598471 BTN3A3O00478 584 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 ZNF195O14628 629 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 FFAR3O14843 346 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 PIP5K1BO14986 540 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 GPR42O15529 346 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 ZW10O43264 779 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 NUDT21O43809 227 aaKnown RBP14.89□□□□□ -0.03
UPF1-206ENST00000598471 PRICKLE3O43900 615 aaPredicted RBP14.89□□□□□ -0.03
UPF1-206ENST00000598471 PCDHGA12O60330 932 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 VPS4BO75351 444 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 ULK1O75385 1050 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 LMNAP02545 664 aaKnown RBP14.89□□□□□ -0.03
UPF1-206ENST00000598471 AMD1P17707 334 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 POLR2CP19387 275 aaPredicted RBP14.89□□□□□ -0.03
UPF1-206ENST00000598471 PSMB5P28074 263 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 SERPINB3P29508 390 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 GRK3P35626 688 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 PPM1FP49593 454 aaPredicted RBP14.89□□□□□ -0.03
UPF1-206ENST00000598471 IDH3AP50213 366 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 PHEXP78562 749 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 E2F2Q14209 437 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 SLBPQ14493 270 aaKnown RBP eCLIP14.89□□□□□ -0.03
UPF1-206ENST00000598471 SUZ12Q15022 739 aaKnown RBP14.89□□□□□ -0.03
UPF1-206ENST00000598471 NR0B2Q15466 257 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 ZRSR2Q15696 482 aaKnown RBP14.89□□□□□ -0.03
UPF1-206ENST00000598471 UGT3A2Q3SY77 523 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 PLA2G2CQ5R387 149 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 FRG2Q64ET8 278 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 MED27Q6P2C8 311 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 RNF165Q6ZSG1 346 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 ADCK2Q7Z695 626 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 SLC35F3Q8IY50 421 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 MINDY1Q8N5J2 469 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 FAM122AQ96E09 287 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 FRG2BQ96QU4 278 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 NRTNQ99748 197 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 CCDC28BQ9BUN5 200 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 TBC1D10AQ9BXI6 508 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 PITHD1Q9GZP4 211 aaPredicted RBP14.89□□□□□ -0.03
UPF1-206ENST00000598471 EPB41L1Q9H4G0 881 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 KCNK13Q9HB14 408 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 IL21RQ9HBE5 538 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 EVA1BQ9NVM1 165 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 HRASLS2Q9NWW9 162 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 SPHK1Q9NYA1 384 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 ACTR10Q9NZ32 417 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 BTRCQ9Y297 605 aa14.89□□□□□ -0.03
UPF1-206ENST00000598471 SDK1Q7Z5N4 2213 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 KCNE1BA0A087WTH5 132 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 OR5K3A6NET4 321 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 H0YIV9 168 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 SLC28A1O00337 649 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 MANBAO00462 879 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 PPM1DO15297 605 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 DCTN3O75935 186 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 UBXN7O94888 489 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 PROS1P07225 676 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 ZNF883P0CG24 379 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 GIMD1P0DJR0 217 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 GLB1P16278 677 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 UGT2B7P16662 529 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 VARSP26640 1264 aaKnown RBP14.88□□□□□ -0.03
UPF1-206ENST00000598471 PEBP1P30086 187 aaKnown RBP14.88□□□□□ -0.03
UPF1-206ENST00000598471 CCDC6Q16204 474 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 IMPG1Q17R60 797 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 SLC5A12Q1EHB4 618 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 CATSPEREQ5SY80 951 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 VWA5B1Q5TIE3 1220 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 NXNQ6DKJ4 435 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 MAVSQ7Z434 540 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 ZNF761Q86XN6 746 aaPredicted RBP14.88□□□□□ -0.03
UPF1-206ENST00000598471 ABHD11Q8NFV4 315 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 OR2L3Q8NG85 312 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 SELENOMQ8WWX9 145 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 PPP1R36Q96LQ0 422 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 TCF7L2Q9NQB0 619 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 TMEM184CQ9NVA4 438 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 ANKMY1Q9P2S6 941 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 LRIT1Q9P2V4 623 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 ZNF490Q9ULM2 529 aaPredicted RBP14.88□□□□□ -0.03
UPF1-206ENST00000598471 SNX7Q9UNH6 387 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 TRIM33Q9UPN9 1127 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 SH2B3Q9UQQ2 575 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 RNF215Q9Y6U7 377 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 TMEM131Q92545 1883 aa14.88□□□□□ -0.03
UPF1-206ENST00000598471 ARHGEF17Q96PE2 2063 aaPredicted RBP14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms