RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 PGGT1BP53609 377 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 SSPNQ14714 243 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 BBS9Q3SYG4 887 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 CYHR1Q6ZMK1 362 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 PPP1R32Q7Z5V6 425 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 TTC29Q8NA56 475 aaPredicted RBP13.16□□□□□ -0.3
SCAF1-203ENST00000598359 CD200R1Q8TD46 325 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 DLG3Q92796 817 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 KCNJ9Q92806 393 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 ZUFSPQ96AP4 578 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 ZNF285Q96NJ3 590 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 C17orf62Q9BQA9 187 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 AARSD1Q9BTE6 412 aaKnown RBP13.16□□□□□ -0.3
SCAF1-203ENST00000598359 PLAC1Q9HBJ0 212 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 MLXIPLQ9NP71 852 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 FAM114A2Q9NRY5 505 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 CTSFQ9UBX1 484 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 ZC3H7BQ9UGR2 993 aaKnown RBP13.16□□□□□ -0.3
SCAF1-203ENST00000598359 TAC3Q9UHF0 121 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 DHRS7Q9Y394 339 aa13.16□□□□□ -0.3
SCAF1-203ENST00000598359 PCDHGA9Q9Y5G4 932 aaKnown RBP13.16□□□□□ -0.3
SCAF1-203ENST00000598359 CCDC88CQ9P219 2028 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 IGKV1-8A0A0C4DH67 115 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 OR2A25A4D2G3 310 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 MYBL2P10244 700 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 GABRB3P28472 473 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 CMPK1P30085 196 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 PNLIPRP1P54315 467 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 ARSFP54793 590 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 TIAL1Q01085 375 aaKnown RBP eCLIP13.15□□□□□ -0.3
SCAF1-203ENST00000598359 UBAP2LQ14157 1087 aaKnown RBP13.15□□□□□ -0.3
SCAF1-203ENST00000598359 CASP8Q14790 479 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 GRM7Q14831 915 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 TTLL9Q3SXZ7 439 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 TCTE1Q5JU00 501 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 RBM20Q5T481 1227 aaKnown RBP13.15□□□□□ -0.3
SCAF1-203ENST00000598359 FBXO42Q6P3S6 717 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 EMBQ6PCB8 327 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 MED25Q71SY5 747 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 RNF44Q7L0R7 432 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 OVCH1Q7RTY7 1134 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 IFT20Q8IY31 132 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 TMEM102Q8N9M5 508 aaPredicted RBP13.15□□□□□ -0.3
SCAF1-203ENST00000598359 CALML6Q8TD86 181 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 ZNF480Q8WV37 535 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 ASB11Q8WXH4 323 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 SMPDL3AQ92484 453 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 INPP5DQ92835 1189 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 CAVIN3Q969G5 261 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 CFAP36Q96G28 342 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 KRT12Q99456 494 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 EBNA1BP2Q99848 306 aaKnown RBP13.15□□□□□ -0.3
SCAF1-203ENST00000598359 MESP1Q9BRJ9 268 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 TRIM51Q9BSJ1 452 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 FAM167BQ9BTA0 163 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 SOX17Q9H6I2 414 aaPredicted RBP13.15□□□□□ -0.3
SCAF1-203ENST00000598359 MRPS30Q9NP92 439 aaKnown RBP13.15□□□□□ -0.3
SCAF1-203ENST00000598359 P4HTMQ9NXG6 502 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 PCYOX1Q9UHG3 505 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 KLK4Q9Y5K2 254 aa13.15□□□□□ -0.3
SCAF1-203ENST00000598359 SPTBN1Q01082 2364 aaKnown RBP13.14□□□□□ -0.31
SCAF1-203ENST00000598359 HYKKA2RU49 373 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 FITM1A5D6W6 292 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 H0YGG7 62 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 PEX12O00623 359 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 RAD51CO43502 376 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 FKBP9O95302 570 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 STATHP02808 62 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 MPC1LP0DKB6 136 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 CARSP49589 748 aaKnown RBP13.14□□□□□ -0.31
SCAF1-203ENST00000598359 RRADP55042 308 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 CDKN2DP55273 166 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 ARF3P61204 181 aaPredicted RBP13.14□□□□□ -0.31
SCAF1-203ENST00000598359 NKG7Q16617 165 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 PRR30Q53SZ7 412 aaPredicted RBP13.14□□□□□ -0.31
SCAF1-203ENST00000598359 NEK10Q6ZWH5 1172 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 UBE2R2Q712K3 238 aaPredicted RBP13.14□□□□□ -0.31
SCAF1-203ENST00000598359 PAQR7Q86WK9 346 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 PLD3Q8IV08 490 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 PRSS58Q8IYP2 241 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 C2CD4AQ8NCU7 369 aaPredicted RBP13.14□□□□□ -0.31
SCAF1-203ENST00000598359 EEF1AKMT1Q8WVE0 214 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 MIB2Q96AX9 1013 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 PTERQ96BW5 349 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 C10orf90Q96M02 699 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 SPSB2Q99619 263 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 ZFYVE21Q9BQ24 234 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 PLCD4Q9BRC7 762 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 WDR83Q9BRX9 315 aaKnown RBP13.14□□□□□ -0.31
SCAF1-203ENST00000598359 CUEDC1Q9NWM3 386 aaPredicted RBP13.14□□□□□ -0.31
SCAF1-203ENST00000598359 GPR83Q9NYM4 423 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 ADAMTS6Q9UKP5 1117 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 CHMP2BQ9UQN3 213 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 CACNA1DQ01668 2161 aa13.14□□□□□ -0.31
SCAF1-203ENST00000598359 ICE1Q9Y2F5 2266 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 TTLL8A6PVC2 850 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 E7ENX8 843 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 GFYI3L273 518 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 SMAPO00193 183 aa13.13□□□□□ -0.31
SCAF1-203ENST00000598359 FFAR3O14843 346 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms